Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:131023545-131574835

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173 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atrn 2 130906495 to 131030333 123838 + protein coding gene attractin
Gm30286 2 131014185 to 131025161 10976 - lncRNA gene predicted gene, 30286
Tssr26324 2 131025106 to 131025125 19 - TSS region transcription start site region 26324
Tssr26325 2 131025147 to 131025159 12 - TSS region transcription start site region 26325
Gm39937 2 131031593 to 131034627 3034 + lncRNA gene predicted gene, 39937
Gfra4 2 131039632 to 131043088 3456 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 4
Mir6973b 2 131040319 to 131040398 79 - miRNA gene microRNA 6973b
Cpgi12278 2 131040791 to 131042149 1358 CpG island CpG island 12278
Tssr26326 2 131041293 to 131041313 20 - TSS region transcription start site region 26326
Tssr26327 2 131041317 to 131041356 39 - TSS region transcription start site region 26327
Tssr26328 2 131041357 to 131041368 11 - TSS region transcription start site region 26328
Tssr26329 2 131041388 to 131041471 83 - TSS region transcription start site region 26329
Tssr26330 2 131041477 to 131041554 77 - TSS region transcription start site region 26330
Adam33 2 131050819 to 131063814 12995 - protein coding gene a disintegrin and metallopeptidase domain 33
Cpgi12279 2 131053817 to 131055634 1817 CpG island CpG island 12279
Tssr26331 2 131054512 to 131054553 41 - TSS region transcription start site region 26331
Tssr26332 2 131055826 to 131055830 4 - TSS region transcription start site region 26332
Tssr26333 2 131056565 to 131056576 11 - TSS region transcription start site region 26333
Tssr26334 2 131056581 to 131056610 29 - TSS region transcription start site region 26334
Cpgi12280 2 131063423 to 131063817 394 CpG island CpG island 12280
Tssr26335 2 131063508 to 131063559 51 - TSS region transcription start site region 26335
Tssr26336 2 131067286 to 131067331 45 - TSS region transcription start site region 26336
Tssr26337 2 131068125 to 131068164 39 - TSS region transcription start site region 26337
Tssr26338 2 131068455 to 131068478 23 - TSS region transcription start site region 26338
Tssr26339 2 131068529 to 131068543 14 - TSS region transcription start site region 26339
Tssr26340 2 131068611 to 131068624 13 - TSS region transcription start site region 26340
Tssr20240 2 131068712 to 131068733 21 + TSS region transcription start site region 20240
Tssr26341 2 131068876 to 131068890 14 - TSS region transcription start site region 26341
Tssr26342 2 131068897 to 131068916 19 - TSS region transcription start site region 26342
Tssr26343 2 131068951 to 131068964 13 - TSS region transcription start site region 26343
Tssr26344 2 131069006 to 131069015 9 - TSS region transcription start site region 26344
Siglec1 2 131069220 to 131086765 17545 - protein coding gene sialic acid binding Ig-like lectin 1, sialoadhesin
Tssr26345 2 131071148 to 131071159 11 - TSS region transcription start site region 26345
Tssr26346 2 131071229 to 131071249 20 - TSS region transcription start site region 26346
Tssr26347 2 131071262 to 131071280 18 - TSS region transcription start site region 26347
Tssr26348 2 131071379 to 131071397 18 - TSS region transcription start site region 26348
Tssr26349 2 131072623 to 131072632 9 - TSS region transcription start site region 26349
Tssr26350 2 131072636 to 131072651 15 - TSS region transcription start site region 26350
Tssr26351 2 131072653 to 131072673 20 - TSS region transcription start site region 26351
Tssr26352 2 131074303 to 131074317 14 - TSS region transcription start site region 26352
Tssr26353 2 131074428 to 131074446 18 - TSS region transcription start site region 26353
Tssr26354 2 131074500 to 131074518 18 - TSS region transcription start site region 26354
Tssr26355 2 131075016 to 131075032 16 - TSS region transcription start site region 26355
Tssr26356 2 131079440 to 131079444 4 - TSS region transcription start site region 26356
Tssr26357 2 131080412 to 131080424 12 - TSS region transcription start site region 26357
Tssr26358 2 131080593 to 131080603 10 - TSS region transcription start site region 26358
Tssr26359 2 131081375 to 131081407 32 - TSS region transcription start site region 26359
Tssr26360 2 131081423 to 131081436 13 - TSS region transcription start site region 26360
Tssr26361 2 131083362 to 131083376 14 - TSS region transcription start site region 26361
Tssr26362 2 131083815 to 131083831 16 - TSS region transcription start site region 26362
Tssr26363 2 131083851 to 131083865 14 - TSS region transcription start site region 26363
Tssr26364 2 131085073 to 131085093 20 - TSS region transcription start site region 26364
Tssr26365 2 131085196 to 131085218 22 - TSS region transcription start site region 26365
Tssr26366 2 131085588 to 131085599 11 - TSS region transcription start site region 26366
Tssr26367 2 131085653 to 131085665 12 - TSS region transcription start site region 26367
Tssr26368 2 131085765 to 131085779 14 - TSS region transcription start site region 26368
Tssr26369 2 131086284 to 131086309 25 - TSS region transcription start site region 26369
Tssr20241 2 131086390 to 131086405 15 + TSS region transcription start site region 20241
Tssr26370 2 131086738 to 131086819 81 - TSS region transcription start site region 26370
Tssr26371 2 131086854 to 131086867 13 - TSS region transcription start site region 26371
Gm30378 2 131102894 to 131108415 5521 + lncRNA gene predicted gene, 30378
Tssr20242 2 131103447 to 131103458 11 + TSS region transcription start site region 20242
Tssr20243 2 131103466 to 131103471 5 + TSS region transcription start site region 20243
Tssr655 2 131103545 to 131103555 10 + TSS region transcription start site region 655
Cpgi12281 2 131127243 to 131127653 410 CpG island CpG island 12281
Tssr20244 2 131127392 to 131127461 69 + TSS region transcription start site region 20244
Hspa12b 2 131127412 to 131145985 18573 + protein coding gene heat shock protein 12B
Gm11037 2 131133497 to 131134215 718 + protein coding gene predicted gene 11037
Tssr26372 2 131141718 to 131141721 3 - TSS region transcription start site region 26372
Cpgi12282 2 131142622 to 131143136 514 CpG island CpG island 12282
Cpgi12283 2 131144558 to 131145271 713 CpG island CpG island 12283
1700037H04Rik 2 131146324 to 131160081 13757 - protein coding gene RIKEN cDNA 1700037H04 gene
Tssr26373 2 131146571 to 131146580 9 - TSS region transcription start site region 26373
Tssr26374 2 131146766 to 131146790 24 - TSS region transcription start site region 26374
Tssr26375 2 131146816 to 131146830 14 - TSS region transcription start site region 26375
Tssr26376 2 131148406 to 131148449 43 - TSS region transcription start site region 26376
Tssr26377 2 131148467 to 131148480 13 - TSS region transcription start site region 26377
Tssr26378 2 131158516 to 131158525 9 - TSS region transcription start site region 26378
Tssr26379 2 131158545 to 131158555 10 - TSS region transcription start site region 26379
Cpgi12284 2 131159523 to 131160929 1406 CpG island CpG island 12284
Gm14232 2 131159537 to 131171342 11805 + antisense lncRNA gene predicted gene 14232
Tssr26380 2 131159982 to 131160005 23 - TSS region transcription start site region 26380
Tssr26381 2 131160006 to 131160051 45 - TSS region transcription start site region 26381
Tssr26382 2 131164048 to 131164056 8 - TSS region transcription start site region 26382
Tssr26383 2 131164077 to 131164087 10 - TSS region transcription start site region 26383
Tssr26384 2 131164114 to 131164126 12 - TSS region transcription start site region 26384
Tssr26385 2 131164143 to 131164152 9 - TSS region transcription start site region 26385
Tssr26386 2 131164154 to 131164170 16 - TSS region transcription start site region 26386
Spef1 2 131170261 to 131174810 4549 - protein coding gene sperm flagellar 1
Tssr20245 2 131170945 to 131170953 8 + TSS region transcription start site region 20245
Tssr20246 2 131170962 to 131170971 9 + TSS region transcription start site region 20246
Cpgi12285 2 131171362 to 131172091 729 CpG island CpG island 12285
Tssr26387 2 131174764 to 131174779 15 - TSS region transcription start site region 26387
Tssr26388 2 131174788 to 131174815 27 - TSS region transcription start site region 26388
Tssr26389 2 131174821 to 131174837 16 - TSS region transcription start site region 26389
Cenpb 2 131177289 to 131180067 2778 - protein coding gene centromere protein B
Cpgi12286 2 131178693 to 131180353 1660 CpG island CpG island 12286
Tssr26390 2 131179985 to 131180092 107 - TSS region transcription start site region 26390
Cpgi12287 2 131186579 to 131187533 954 CpG island CpG island 12287
Tssr20247 2 131186942 to 131186971 29 + TSS region transcription start site region 20247
Cdc25b 2 131186949 to 131198497 11548 + protein coding gene cell division cycle 25B
Tssr20248 2 131186983 to 131187001 18 + TSS region transcription start site region 20248
Tssr20249 2 131187004 to 131187027 23 + TSS region transcription start site region 20249
Tssr20250 2 131187077 to 131187118 41 + TSS region transcription start site region 20250
Tssr20251 2 131189079 to 131189096 17 + TSS region transcription start site region 20251
Tssr20252 2 131193268 to 131193276 8 + TSS region transcription start site region 20252
Tssr20253 2 131207031 to 131207049 18 + TSS region transcription start site region 20253
Tssr20254 2 131207078 to 131207095 17 + TSS region transcription start site region 20254
Cpgi12288 2 131209908 to 131210724 816 CpG island CpG island 12288
Ap5s1 2 131210360 to 131213514 3154 + protein coding gene adaptor-related protein 5 complex, sigma 1 subunit
Tssr20255 2 131210363 to 131210476 113 + TSS region transcription start site region 20255
Tssr20256 2 131210501 to 131210552 51 + TSS region transcription start site region 20256
Tssr20257 2 131232751 to 131232769 18 + TSS region transcription start site region 20257
Cpgi12289 2 131233773 to 131234522 749 CpG island CpG island 12289
Tssr20258 2 131234043 to 131234136 93 + TSS region transcription start site region 20258
Mavs 2 131234063 to 131248025 13962 + protein coding gene mitochondrial antiviral signaling protein
Cpgi12290 2 131262012 to 131263187 1175 CpG island CpG island 12290
Tssr20259 2 131262042 to 131262047 5 + TSS region transcription start site region 20259
Tssr20260 2 131262469 to 131262563 94 + TSS region transcription start site region 20260
Pank2 2 131262495 to 131299188 36693 + protein coding gene pantothenate kinase 2
Tssr20261 2 131280351 to 131280367 16 + TSS region transcription start site region 20261
Tssr20262 2 131287321 to 131287324 3 + TSS region transcription start site region 20262
Mir103-2 2 131288052 to 131288137 85 + miRNA gene microRNA 103-2
Rnf24 2 131298488 to 131352892 54404 - protein coding gene ring finger protein 24
Gm14233 2 131298545 to 131299835 1290 + unclassified non-coding RNA gene predicted gene 14233
Snrpert 2 131322088 to 131322366 278 - pseudogene small nuclear ribonucleoprotein E, pseudogene
Tssr26391 2 131328982 to 131328989 7 - TSS region transcription start site region 26391
Tssr26392 2 131337634 to 131337643 9 - TSS region transcription start site region 26392
Cpgi12291 2 131352330 to 131353184 854 CpG island CpG island 12291
Tssr26393 2 131352813 to 131352832 19 - TSS region transcription start site region 26393
Tssr26394 2 131352834 to 131352856 22 - TSS region transcription start site region 26394
Tssr26395 2 131352857 to 131352889 32 - TSS region transcription start site region 26395
Tssr20263 2 131352996 to 131353022 26 + TSS region transcription start site region 20263
Gm30590 2 131353113 to 131363938 10825 + lncRNA gene predicted gene, 30590
Gm46765 2 131353158 to 131394652 41494 - lncRNA gene predicted gene, 46765
Tssr20264 2 131393089 to 131393100 11 + TSS region transcription start site region 20264
Gm22902 2 131413661 to 131413962 301 - ribozyme gene predicted gene, 22902
Gm14283 2 131414921 to 131415245 324 - pseudogene predicted gene 14283
Tssr656 2 131430646 to 131430676 30 + TSS region transcription start site region 656
Tssr26396 2 131434371 to 131434381 10 - TSS region transcription start site region 26396
Tssr26397 2 131434389 to 131434396 7 - TSS region transcription start site region 26397
Tssr26398 2 131443447 to 131443458 11 - TSS region transcription start site region 26398
Gm14304 2 131454128 to 131454640 512 - pseudogene predicted gene 14304
Tssr26399 2 131454399 to 131454413 14 - TSS region transcription start site region 26399
D2Mit307 2 131471753 to 131471901 148 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 307
Gm30679 2 131481838 to 131491749 9911 - lncRNA gene predicted gene, 30679
Cpgi12292 2 131491499 to 131492859 1360 CpG island CpG island 12292
Tssr26400 2 131491684 to 131491714 30 - TSS region transcription start site region 26400
Tssr20265 2 131491751 to 131491760 9 + TSS region transcription start site region 20265
Smox 2 131491784 to 131525183 33399 + protein coding gene spermine oxidase
Tssr20266 2 131491883 to 131491940 57 + TSS region transcription start site region 20266
Tssr20267 2 131491958 to 131491969 11 + TSS region transcription start site region 20267
Tssr20268 2 131495670 to 131495675 5 + TSS region transcription start site region 20268
Tssr20269 2 131498628 to 131498635 7 + TSS region transcription start site region 20269
Tssr20270 2 131499265 to 131499269 4 + TSS region transcription start site region 20270
Tssr20271 2 131505658 to 131505661 3 + TSS region transcription start site region 20271
Tssr20272 2 131506601 to 131506609 8 + TSS region transcription start site region 20272
Tssr20273 2 131508967 to 131508979 12 + TSS region transcription start site region 20273
Tssr20274 2 131514531 to 131514551 20 + TSS region transcription start site region 20274
Tssr20275 2 131514860 to 131514865 5 + TSS region transcription start site region 20275
Cpgi12293 2 131520519 to 131521165 646 CpG island CpG island 12293
Gm30732 2 131527212 to 131530344 3132 + protein coding gene predicted gene, 30732
Gm39938 2 131537662 to 131561060 23398 + lncRNA gene predicted gene, 39938
Tssr20276 2 131538503 to 131538511 8 + TSS region transcription start site region 20276
Cpgi12294 2 131545781 to 131546759 978 CpG island CpG island 12294
Adra1d 2 131545850 to 131562283 16433 - protein coding gene adrenergic receptor, alpha 1d
Cpgi12295 2 131561032 to 131563141 2109 CpG island CpG island 12295
Tssr20277 2 131561605 to 131561619 14 + TSS region transcription start site region 20277
Gm14285 2 131561614 to 131563179 1565 + antisense lncRNA gene predicted gene 14285
Tssr20278 2 131561638 to 131561651 13 + TSS region transcription start site region 20278
Tssr26401 2 131562488 to 131562502 14 - TSS region transcription start site region 26401
Tssr26402 2 131562515 to 131562535 20 - TSS region transcription start site region 26402
Tssr26403 2 131562755 to 131562773 18 - TSS region transcription start site region 26403