Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:130963817-131145634

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atrn 2 130906495 to 131030333 123838 + protein coding gene attractin
Gm14049 2 130987984 to 130988619 635 + pseudogene predicted gene 14049
Tssr26323 2 131012369 to 131012372 3 - TSS region transcription start site region 26323
Gm30286 2 131014185 to 131025161 10976 - lncRNA gene predicted gene, 30286
Tssr26324 2 131025106 to 131025125 19 - TSS region transcription start site region 26324
Tssr26325 2 131025147 to 131025159 12 - TSS region transcription start site region 26325
Gm39937 2 131031593 to 131034627 3034 + lncRNA gene predicted gene, 39937
Gfra4 2 131039632 to 131043088 3456 - protein coding gene glial cell line derived neurotrophic factor family receptor alpha 4
Mir6973b 2 131040319 to 131040398 79 - miRNA gene microRNA 6973b
Cpgi12278 2 131040791 to 131042149 1358 CpG island CpG island 12278
Tssr26326 2 131041293 to 131041313 20 - TSS region transcription start site region 26326
Tssr26327 2 131041317 to 131041356 39 - TSS region transcription start site region 26327
Tssr26328 2 131041357 to 131041368 11 - TSS region transcription start site region 26328
Tssr26329 2 131041388 to 131041471 83 - TSS region transcription start site region 26329
Tssr26330 2 131041477 to 131041554 77 - TSS region transcription start site region 26330
Adam33 2 131050819 to 131063814 12995 - protein coding gene a disintegrin and metallopeptidase domain 33
Cpgi12279 2 131053817 to 131055634 1817 CpG island CpG island 12279
Tssr26331 2 131054512 to 131054553 41 - TSS region transcription start site region 26331
Tssr26332 2 131055826 to 131055830 4 - TSS region transcription start site region 26332
Tssr26333 2 131056565 to 131056576 11 - TSS region transcription start site region 26333
Tssr26334 2 131056581 to 131056610 29 - TSS region transcription start site region 26334
Cpgi12280 2 131063423 to 131063817 394 CpG island CpG island 12280
Tssr26335 2 131063508 to 131063559 51 - TSS region transcription start site region 26335
Tssr26336 2 131067286 to 131067331 45 - TSS region transcription start site region 26336
Tssr26337 2 131068125 to 131068164 39 - TSS region transcription start site region 26337
Tssr26338 2 131068455 to 131068478 23 - TSS region transcription start site region 26338
Tssr26339 2 131068529 to 131068543 14 - TSS region transcription start site region 26339
Tssr26340 2 131068611 to 131068624 13 - TSS region transcription start site region 26340
Tssr20240 2 131068712 to 131068733 21 + TSS region transcription start site region 20240
Tssr26341 2 131068876 to 131068890 14 - TSS region transcription start site region 26341
Tssr26342 2 131068897 to 131068916 19 - TSS region transcription start site region 26342
Tssr26343 2 131068951 to 131068964 13 - TSS region transcription start site region 26343
Tssr26344 2 131069006 to 131069015 9 - TSS region transcription start site region 26344
Siglec1 2 131069220 to 131086765 17545 - protein coding gene sialic acid binding Ig-like lectin 1, sialoadhesin
Tssr26345 2 131071148 to 131071159 11 - TSS region transcription start site region 26345
Tssr26346 2 131071229 to 131071249 20 - TSS region transcription start site region 26346
Tssr26347 2 131071262 to 131071280 18 - TSS region transcription start site region 26347
Tssr26348 2 131071379 to 131071397 18 - TSS region transcription start site region 26348
Tssr26349 2 131072623 to 131072632 9 - TSS region transcription start site region 26349
Tssr26350 2 131072636 to 131072651 15 - TSS region transcription start site region 26350
Tssr26351 2 131072653 to 131072673 20 - TSS region transcription start site region 26351
Tssr26352 2 131074303 to 131074317 14 - TSS region transcription start site region 26352
Tssr26353 2 131074428 to 131074446 18 - TSS region transcription start site region 26353
Tssr26354 2 131074500 to 131074518 18 - TSS region transcription start site region 26354
Tssr26355 2 131075016 to 131075032 16 - TSS region transcription start site region 26355
Tssr26356 2 131079440 to 131079444 4 - TSS region transcription start site region 26356
Tssr26357 2 131080412 to 131080424 12 - TSS region transcription start site region 26357
Tssr26358 2 131080593 to 131080603 10 - TSS region transcription start site region 26358
Tssr26359 2 131081375 to 131081407 32 - TSS region transcription start site region 26359
Tssr26360 2 131081423 to 131081436 13 - TSS region transcription start site region 26360
Tssr26361 2 131083362 to 131083376 14 - TSS region transcription start site region 26361
Tssr26362 2 131083815 to 131083831 16 - TSS region transcription start site region 26362
Tssr26363 2 131083851 to 131083865 14 - TSS region transcription start site region 26363
Tssr26364 2 131085073 to 131085093 20 - TSS region transcription start site region 26364
Tssr26365 2 131085196 to 131085218 22 - TSS region transcription start site region 26365
Tssr26366 2 131085588 to 131085599 11 - TSS region transcription start site region 26366
Tssr26367 2 131085653 to 131085665 12 - TSS region transcription start site region 26367
Tssr26368 2 131085765 to 131085779 14 - TSS region transcription start site region 26368
Tssr26369 2 131086284 to 131086309 25 - TSS region transcription start site region 26369
Tssr20241 2 131086390 to 131086405 15 + TSS region transcription start site region 20241
Tssr26370 2 131086738 to 131086819 81 - TSS region transcription start site region 26370
Tssr26371 2 131086854 to 131086867 13 - TSS region transcription start site region 26371
Gm30378 2 131102894 to 131108415 5521 + lncRNA gene predicted gene, 30378
Tssr20242 2 131103447 to 131103458 11 + TSS region transcription start site region 20242
Tssr20243 2 131103466 to 131103471 5 + TSS region transcription start site region 20243
Tssr655 2 131103545 to 131103555 10 + TSS region transcription start site region 655
Cpgi12281 2 131127243 to 131127653 410 CpG island CpG island 12281
Tssr20244 2 131127392 to 131127461 69 + TSS region transcription start site region 20244
Hspa12b 2 131127412 to 131145985 18573 + protein coding gene heat shock protein 12B
Gm11037 2 131133497 to 131134215 718 + protein coding gene predicted gene 11037
Tssr26372 2 131141718 to 131141721 3 - TSS region transcription start site region 26372
Cpgi12282 2 131142622 to 131143136 514 CpG island CpG island 12282
Cpgi12283 2 131144558 to 131145271 713 CpG island CpG island 12283