Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:130610328-130800696

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ubox5 2 130590002 to 130630038 40036 - protein coding gene U box domain containing 5
Fastkd5 2 130613840 to 130630027 16187 - protein coding gene FAST kinase domains 5
Tssr20230 2 130629342 to 130629345 3 + TSS region transcription start site region 20230
Cpgi12269 2 130629459 to 130630183 724 CpG island CpG island 12269
Tssr26302 2 130629972 to 130629990 18 - TSS region transcription start site region 26302
Tssr26303 2 130629994 to 130630032 38 - TSS region transcription start site region 26303
Lzts3 2 130632839 to 130642803 9964 - protein coding gene leucine zipper, putative tumor suppressor family member 3
Tssr20231 2 130633409 to 130633423 14 + TSS region transcription start site region 20231
Cpgi12270 2 130634682 to 130635532 850 CpG island CpG island 12270
Cpgi12271 2 130635885 to 130636161 276 CpG island CpG island 12271
Tssr26304 2 130638094 to 130638113 19 - TSS region transcription start site region 26304
Tssr26305 2 130638327 to 130638339 12 - TSS region transcription start site region 26305
Tssr26306 2 130638352 to 130638390 38 - TSS region transcription start site region 26306
Cpgi12272 2 130642248 to 130643159 911 CpG island CpG island 12272
Tssr26307 2 130642770 to 130642811 41 - TSS region transcription start site region 26307
Tssr26308 2 130642822 to 130642844 22 - TSS region transcription start site region 26308
Ddrgk1 2 130654035 to 130664645 10610 - protein coding gene DDRGK domain containing 1
Tssr26309 2 130662172 to 130662186 14 - TSS region transcription start site region 26309
Cpgi12273 2 130664104 to 130664890 786 CpG island CpG island 12273
Tssr26310 2 130664565 to 130664636 71 - TSS region transcription start site region 26310
Cpgi12274 2 130667388 to 130668139 751 CpG island CpG island 12274
Itpa 2 130667610 to 130681614 14004 + protein coding gene inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
Tssr26311 2 130667720 to 130667750 30 - TSS region transcription start site region 26311
Tssr20232 2 130667791 to 130667848 57 + TSS region transcription start site region 20232
Slc4a11 2 130684113 to 130697519 13406 - protein coding gene solute carrier family 4, sodium bicarbonate transporter-like, member 11
Cpgi12275 2 130696514 to 130698215 1701 CpG island CpG island 12275
Tssr26312 2 130697462 to 130697481 19 - TSS region transcription start site region 26312
Gm24893 2 130705328 to 130705696 368 - unclassified non-coding RNA gene predicted gene, 24893
4930402H24Rik 2 130706200 to 130840788 134588 - protein coding gene RIKEN cDNA 4930402H24 gene
Tssr26313 2 130714294 to 130714298 4 - TSS region transcription start site region 26313
Gm19258 2 130766458 to 130766735 277 - pseudogene predicted gene, 19258
Tssr654 2 130768284 to 130768288 4 - TSS region transcription start site region 654
Tssr26314 2 130772065 to 130772069 4 - TSS region transcription start site region 26314