MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:130538477-130589450

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ptpra	2	130450251 to 130554300	104049	+	protein coding gene	protein tyrosine phosphatase, receptor type, A
Tssr20220	2	130539410 to 130539424	14	+	TSS region	transcription start site region 20220
Tssr20221	2	130539429 to 130539438	9	+	TSS region	transcription start site region 20221
Tssr20222	2	130539526 to 130539534	8	+	TSS region	transcription start site region 20222
Tssr20223	2	130541295 to 130541323	28	+	TSS region	transcription start site region 20223
4930473A02Rik	2	130543791 to 130563749	19958	-	antisense lncRNA gene	RIKEN cDNA 4930473A02 gene
Cpgi12266	2	130563477 to 130564450	973		CpG island	CpG island 12266
Tssr26300	2	130563717 to 130563726	9	-	TSS region	transcription start site region 26300
Tssr20224	2	130563732 to 130563798	66	+	TSS region	transcription start site region 20224
Mrps26	2	130563757 to 130565394	1637	+	protein coding gene	mitochondrial ribosomal protein S26
Tssr20225	2	130576170 to 130576176	6	+	TSS region	transcription start site region 20225
Oxt	2	130576173 to 130577054	881	+	protein coding gene	oxytocin
Cpgi12267	2	130576176 to 130577165	989		CpG island	CpG island 12267
Avp	2	130580620 to 130582554	1934	-	protein coding gene	arginine vasopressin
Cpgi12268	2	130580640 to 130581547	907		CpG island	CpG island 12268
Tssr26301	2	130582569 to 130582574	5	-	TSS region	transcription start site region 26301
Tssr20226	2	130589411 to 130589422	11	+	TSS region	transcription start site region 20226
Tssr20227	2	130589431 to 130589451	20	+	TSS region	transcription start site region 20227