Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:130483791-130623749

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ptpra 2 130450251 to 130554300 104049 + protein coding gene protein tyrosine phosphatase, receptor type, A
Tssr26299 2 130488737 to 130488744 7 - TSS region transcription start site region 26299
Tssr20217 2 130490557 to 130490561 4 + TSS region transcription start site region 20217
Tssr20218 2 130503981 to 130503986 5 + TSS region transcription start site region 20218
Tssr20219 2 130504280 to 130504308 28 + TSS region transcription start site region 20219
9530056E24Rik 2 130523995 to 130527284 3289 + unclassified gene RIKEN cDNA 9530056E24 gene
Gm23876 2 130531678 to 130531744 66 - miRNA gene predicted gene, 23876
Tssr20220 2 130539410 to 130539424 14 + TSS region transcription start site region 20220
Tssr20221 2 130539429 to 130539438 9 + TSS region transcription start site region 20221
Tssr20222 2 130539526 to 130539534 8 + TSS region transcription start site region 20222
Tssr20223 2 130541295 to 130541323 28 + TSS region transcription start site region 20223
4930473A02Rik 2 130543791 to 130563749 19958 - antisense lncRNA gene RIKEN cDNA 4930473A02 gene
Cpgi12266 2 130563477 to 130564450 973 CpG island CpG island 12266
Tssr26300 2 130563717 to 130563726 9 - TSS region transcription start site region 26300
Tssr20224 2 130563732 to 130563798 66 + TSS region transcription start site region 20224
Mrps26 2 130563757 to 130565394 1637 + protein coding gene mitochondrial ribosomal protein S26
Tssr20225 2 130576170 to 130576176 6 + TSS region transcription start site region 20225
Oxt 2 130576173 to 130577054 881 + protein coding gene oxytocin
Cpgi12267 2 130576176 to 130577165 989 CpG island CpG island 12267
Avp 2 130580620 to 130582554 1934 - protein coding gene arginine vasopressin
Cpgi12268 2 130580640 to 130581547 907 CpG island CpG island 12268
Tssr26301 2 130582569 to 130582574 5 - TSS region transcription start site region 26301
Tssr20226 2 130589411 to 130589422 11 + TSS region transcription start site region 20226
Tssr20227 2 130589431 to 130589451 20 + TSS region transcription start site region 20227
Tssr20228 2 130589452 to 130589464 12 + TSS region transcription start site region 20228
Tssr20229 2 130589470 to 130589483 13 + TSS region transcription start site region 20229
Ubox5 2 130590002 to 130630038 40036 - protein coding gene U box domain containing 5
Fastkd5 2 130613840 to 130630027 16187 - protein coding gene FAST kinase domains 5