Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:129545517-130087287

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105 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14041 2 129565047 to 129566068 1021 - antisense lncRNA gene predicted gene 14041
Cpgi12250 2 129574701 to 129574890 189 CpG island CpG island 12250
Tssr26269 2 129581727 to 129581732 5 - TSS region transcription start site region 26269
Tssr20126 2 129588255 to 129588292 37 + TSS region transcription start site region 20126
Cpgi12251 2 129592508 to 129594261 1753 CpG island CpG island 12251
Tssr26270 2 129592601 to 129592605 4 - TSS region transcription start site region 26270
Tssr20127 2 129592670 to 129592681 11 + TSS region transcription start site region 20127
Tssr20128 2 129592792 to 129592803 11 + TSS region transcription start site region 20128
Tssr20129 2 129592818 to 129592885 67 + TSS region transcription start site region 20129
Sirpa 2 129592835 to 129632228 39393 + protein coding gene signal-regulatory protein alpha
Tssr20130 2 129592922 to 129592940 18 + TSS region transcription start site region 20130
Tssr20131 2 129592966 to 129592986 20 + TSS region transcription start site region 20131
Tssr20132 2 129593003 to 129593031 28 + TSS region transcription start site region 20132
Tssr20133 2 129593032 to 129593046 14 + TSS region transcription start site region 20133
Tssr20134 2 129593049 to 129593058 9 + TSS region transcription start site region 20134
Tssr20135 2 129593095 to 129593127 32 + TSS region transcription start site region 20135
Tssr20136 2 129593136 to 129593147 11 + TSS region transcription start site region 20136
Tssr20137 2 129593205 to 129593221 16 + TSS region transcription start site region 20137
Tssr20138 2 129593234 to 129593258 24 + TSS region transcription start site region 20138
Tssr20139 2 129593360 to 129593377 17 + TSS region transcription start site region 20139
Tssr20140 2 129593382 to 129593414 32 + TSS region transcription start site region 20140
Tssr20141 2 129593422 to 129593436 14 + TSS region transcription start site region 20141
Tssr20142 2 129593528 to 129593600 72 + TSS region transcription start site region 20142
Tssr26271 2 129593941 to 129593948 7 - TSS region transcription start site region 26271
Tssr26272 2 129595662 to 129595725 63 - TSS region transcription start site region 26272
Tssr20143 2 129596187 to 129596238 51 + TSS region transcription start site region 20143
2900076A13Rik 2 129596354 to 129597218 864 unclassified gene RIKEN cDNA 2900076A13 gene
Tssr20144 2 129601514 to 129601542 28 + TSS region transcription start site region 20144
Tssr20145 2 129602201 to 129602217 16 + TSS region transcription start site region 20145
Tssr20146 2 129603730 to 129603744 14 + TSS region transcription start site region 20146
Tssr20147 2 129608960 to 129608972 12 + TSS region transcription start site region 20147
Tssr20148 2 129609001 to 129609055 54 + TSS region transcription start site region 20148
Tssr20149 2 129615482 to 129615495 13 + TSS region transcription start site region 20149
Tssr20150 2 129615531 to 129615548 17 + TSS region transcription start site region 20150
Tssr20151 2 129615568 to 129615581 13 + TSS region transcription start site region 20151
Tssr20152 2 129615693 to 129615700 7 + TSS region transcription start site region 20152
Tssr20153 2 129616222 to 129616261 39 + TSS region transcription start site region 20153
Tssr20154 2 129616285 to 129616309 24 + TSS region transcription start site region 20154
Tssr20155 2 129616386 to 129616408 22 + TSS region transcription start site region 20155
Tssr20156 2 129616437 to 129616451 14 + TSS region transcription start site region 20156
Tssr20157 2 129616507 to 129616520 13 + TSS region transcription start site region 20157
Tssr20158 2 129616554 to 129616570 16 + TSS region transcription start site region 20158
Tssr20159 2 129616617 to 129616621 4 + TSS region transcription start site region 20159
Tssr20160 2 129618454 to 129618467 13 + TSS region transcription start site region 20160
Tssr20161 2 129618496 to 129618538 42 + TSS region transcription start site region 20161
Tssr20162 2 129629981 to 129629993 12 + TSS region transcription start site region 20162
Tssr26273 2 129629982 to 129630002 20 - TSS region transcription start site region 26273
Tssr20163 2 129630001 to 129630023 22 + TSS region transcription start site region 20163
Tssr26274 2 129630042 to 129630074 32 - TSS region transcription start site region 26274
Tssr20164 2 129630062 to 129630077 15 + TSS region transcription start site region 20164
Tssr20165 2 129630092 to 129630100 8 + TSS region transcription start site region 20165
Tssr20166 2 129630111 to 129630134 23 + TSS region transcription start site region 20166
Tssr20167 2 129630185 to 129630199 14 + TSS region transcription start site region 20167
Tssr20168 2 129630311 to 129630333 22 + TSS region transcription start site region 20168
Tssr20169 2 129630407 to 129630427 20 + TSS region transcription start site region 20169
Tssr20170 2 129630575 to 129630586 11 + TSS region transcription start site region 20170
Tssr20171 2 129630587 to 129630600 13 + TSS region transcription start site region 20171
Tssr26275 2 129630622 to 129630651 29 - TSS region transcription start site region 26275
Tssr20172 2 129630655 to 129630668 13 + TSS region transcription start site region 20172
Tssr20173 2 129630687 to 129630716 29 + TSS region transcription start site region 20173
Tssr20174 2 129630732 to 129630914 182 + TSS region transcription start site region 20174
Tssr20175 2 129630918 to 129630929 11 + TSS region transcription start site region 20175
Tssr20176 2 129630936 to 129630961 25 + TSS region transcription start site region 20176
Tssr20177 2 129631268 to 129631279 11 + TSS region transcription start site region 20177
Tssr20178 2 129631498 to 129631512 14 + TSS region transcription start site region 20178
Tssr20179 2 129636198 to 129636212 14 + TSS region transcription start site region 20179
Pdyn 2 129686565 to 129699844 13279 - protein coding gene prodynorphin
Cpgi12252 2 129688041 to 129688347 306 CpG island CpG island 12252
Tssr26276 2 129699805 to 129699818 13 - TSS region transcription start site region 26276
Tssr26277 2 129699836 to 129699850 14 - TSS region transcription start site region 26277
Gm14046 2 129749901 to 129750409 508 + pseudogene predicted gene 14046
Stk35os1 2 129798369 to 129801459 3090 - lncRNA gene serine/threonine kinase 35, opposite strand 1
Cpgi12253 2 129800164 to 129802089 1925 CpG island CpG island 12253
Tssr20180 2 129800284 to 129800293 9 + TSS region transcription start site region 20180
Tssr20181 2 129800295 to 129800319 24 + TSS region transcription start site region 20181
Tssr20182 2 129800451 to 129800526 75 + TSS region transcription start site region 20182
Stk35 2 129800517 to 129832287 31770 + protein coding gene serine/threonine kinase 35
Tssr20183 2 129800582 to 129800641 59 + TSS region transcription start site region 20183
Tssr20184 2 129800668 to 129800698 30 + TSS region transcription start site region 20184
Tssr20185 2 129800711 to 129800728 17 + TSS region transcription start site region 20185
Tssr20186 2 129800731 to 129800740 9 + TSS region transcription start site region 20186
Tssr20187 2 129800742 to 129800765 23 + TSS region transcription start site region 20187
Tssr20188 2 129801392 to 129801396 4 + TSS region transcription start site region 20188
Tssr26278 2 129801440 to 129801464 24 - TSS region transcription start site region 26278
Tssr26279 2 129801478 to 129801495 17 - TSS region transcription start site region 26279
Tssr20189 2 129801566 to 129801605 39 + TSS region transcription start site region 20189
Tssr20190 2 129832069 to 129832075 6 + TSS region transcription start site region 20190
Gm39933 2 129882483 to 129897531 15048 - lncRNA gene predicted gene, 39933
Tssr26280 2 129895385 to 129895399 14 - TSS region transcription start site region 26280
Cpgi12254 2 129908913 to 129909583 670 CpG island CpG island 12254
Gm10183 2 129927502 to 129929631 2129 unclassified gene predicted gene 10183
Gm28196 2 129948568 to 129949207 639 + lincRNA gene predicted gene 28196
Tssr20191 2 130012336 to 130012350 14 + TSS region transcription start site region 20191
Tgm3 2 130012349 to 130050399 38050 + protein coding gene transglutaminase 3, E polypeptide
Mir6339 2 130016292 to 130016408 116 - miRNA gene microRNA 6339
Tssr20192 2 130038450 to 130038476 26 + TSS region transcription start site region 20192
Tssr20193 2 130040415 to 130040448 33 + TSS region transcription start site region 20193
Tssr20194 2 130044531 to 130044540 9 + TSS region transcription start site region 20194
Tssr20195 2 130044616 to 130044621 5 + TSS region transcription start site region 20195
Tssr26281 2 130048343 to 130048348 5 - TSS region transcription start site region 26281
Tssr26282 2 130048533 to 130048550 17 - TSS region transcription start site region 26282
Tssr20196 2 130048544 to 130048569 25 + TSS region transcription start site region 20196
Tssr26283 2 130048588 to 130048599 11 - TSS region transcription start site region 26283
Gm22424 2 130071724 to 130071810 86 + snoRNA gene predicted gene, 22424
Gm24665 2 130086041 to 130086169 128 + snoRNA gene predicted gene, 24665