Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:129129570-129606139

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171 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lmr28a 2 103265371 to 129371085 26105714 QTL leishmaniasis resistance 28a
Cpgi12247 2 129129242 to 129130080 838 CpG island CpG island 12247
Chchd5 2 129129700 to 129134112 4412 + protein coding gene coiled-coil-helix-coiled-coil-helix domain containing 5
Tssr20101 2 129129782 to 129129791 9 + TSS region transcription start site region 20101
Tssr20102 2 129129797 to 129129831 34 + TSS region transcription start site region 20102
Tssr20103 2 129130152 to 129130171 19 + TSS region transcription start site region 20103
Gm14026 2 129168700 to 129170488 1788 + pseudogene predicted gene 14026
Tssr26187 2 129174826 to 129174827 1 - TSS region transcription start site region 26187
AI847159 2 129178148 to 129180673 2525 - antisense lncRNA gene expressed sequence AI847159
Tssr26188 2 129180638 to 129180659 21 - TSS region transcription start site region 26188
Tssr26189 2 129180662 to 129180671 9 - TSS region transcription start site region 26189
Gm14029 2 129182482 to 129183947 1465 - antisense lncRNA gene predicted gene 14029
Gm39932 2 129182673 to 129193314 10641 + lncRNA gene predicted gene, 39932
Tssr26190 2 129183777 to 129183838 61 - TSS region transcription start site region 26190
Gm4430 2 129196086 to 129197126 1040 - unclassified gene predicted gene 4430
Tssr20104 2 129196587 to 129196619 32 + TSS region transcription start site region 20104
Cpgi12248 2 129198078 to 129199594 1516 CpG island CpG island 12248
Tssr649 2 129198502 to 129198513 11 - TSS region transcription start site region 649
Tssr26191 2 129198548 to 129198564 16 - TSS region transcription start site region 26191
Tssr26192 2 129198568 to 129198588 20 - TSS region transcription start site region 26192
Tssr20105 2 129198757 to 129198769 12 + TSS region transcription start site region 20105
Slc20a1 2 129198773 to 129211615 12842 + protein coding gene solute carrier family 20, member 1
Tssr20106 2 129198793 to 129198811 18 + TSS region transcription start site region 20106
Tssr26193 2 129199181 to 129199197 16 - TSS region transcription start site region 26193
Tssr26194 2 129199205 to 129199267 62 - TSS region transcription start site region 26194
Tssr20107 2 129205206 to 129205210 4 + TSS region transcription start site region 20107
9830144P21Rik 2 129205958 to 129230579 24621 - unclassified gene RIKEN cDNA 9830144P21 gene
A730036I17Rik 2 129218969 to 129235604 16635 + lincRNA gene RIKEN cDNA A730036I17 gene
Tssr650 2 129225464 to 129225466 2 + TSS region transcription start site region 650
Tssr20108 2 129228024 to 129228045 21 + TSS region transcription start site region 20108
Tssr20109 2 129246357 to 129246361 4 + TSS region transcription start site region 20109
Gm14024 2 129246376 to 129268526 22150 + antisense lncRNA gene predicted gene 14024
Ckap2l 2 129268210 to 129297212 29002 - protein coding gene cytoskeleton associated protein 2-like
Tssr26195 2 129288902 to 129288903 1 - TSS region transcription start site region 26195
Cpgi12249 2 129296701 to 129297514 813 CpG island CpG island 12249
Tssr26196 2 129297148 to 129297201 53 - TSS region transcription start site region 26196
Tssr26197 2 129297205 to 129297216 11 - TSS region transcription start site region 26197
Tssr26198 2 129297224 to 129297231 7 - TSS region transcription start site region 26198
Tssr20110 2 129297361 to 129297376 15 + TSS region transcription start site region 20110
Gm14023 2 129297370 to 129307826 10456 + lncRNA gene predicted gene 14023
Il1a 2 129299610 to 129309972 10362 - protein coding gene interleukin 1 alpha
Tssr26199 2 129299807 to 129299817 10 - TSS region transcription start site region 26199
Tssr26200 2 129299848 to 129299868 20 - TSS region transcription start site region 26200
Tssr26201 2 129299914 to 129299987 73 - TSS region transcription start site region 26201
Tssr26202 2 129299991 to 129300050 59 - TSS region transcription start site region 26202
Tssr26203 2 129300054 to 129300072 18 - TSS region transcription start site region 26203
Tssr26204 2 129300162 to 129300177 15 - TSS region transcription start site region 26204
Tssr26205 2 129300191 to 129300230 39 - TSS region transcription start site region 26205
Tssr26206 2 129300245 to 129300262 17 - TSS region transcription start site region 26206
Tssr26207 2 129300337 to 129300340 3 - TSS region transcription start site region 26207
Tssr20111 2 129300433 to 129300444 11 + TSS region transcription start site region 20111
Tssr26208 2 129300529 to 129300568 39 - TSS region transcription start site region 26208
Tssr26209 2 129300615 to 129300649 34 - TSS region transcription start site region 26209
Tssr26210 2 129300730 to 129300766 36 - TSS region transcription start site region 26210
Tssr26211 2 129300880 to 129300903 23 - TSS region transcription start site region 26211
Tssr26212 2 129300939 to 129300946 7 - TSS region transcription start site region 26212
Tssr26213 2 129301546 to 129301549 3 - TSS region transcription start site region 26213
Tssr26214 2 129302955 to 129302971 16 - TSS region transcription start site region 26214
Tssr26215 2 129302978 to 129302990 12 - TSS region transcription start site region 26215
Tssr26216 2 129303764 to 129303785 21 - TSS region transcription start site region 26216
Tssr26217 2 129303794 to 129303807 13 - TSS region transcription start site region 26217
Tssr26218 2 129304713 to 129304727 14 - TSS region transcription start site region 26218
Tssr26219 2 129304764 to 129304776 12 - TSS region transcription start site region 26219
Tssr26220 2 129304794 to 129304808 14 - TSS region transcription start site region 26220
Tssr26221 2 129304813 to 129304855 42 - TSS region transcription start site region 26221
Tssr26222 2 129305888 to 129305899 11 - TSS region transcription start site region 26222
Tssr26223 2 129305913 to 129305925 12 - TSS region transcription start site region 26223
Tssr26224 2 129306165 to 129306179 14 - TSS region transcription start site region 26224
Tssr26225 2 129306458 to 129306464 6 - TSS region transcription start site region 26225
Tssr26226 2 129306501 to 129306531 30 - TSS region transcription start site region 26226
Tssr26227 2 129306538 to 129306552 14 - TSS region transcription start site region 26227
Tssr26228 2 129306561 to 129306584 23 - TSS region transcription start site region 26228
Tssr26229 2 129306595 to 129306621 26 - TSS region transcription start site region 26229
Tssr26230 2 129306638 to 129306649 11 - TSS region transcription start site region 26230
Tssr26231 2 129306663 to 129306678 15 - TSS region transcription start site region 26231
Tssr26232 2 129306792 to 129306805 13 - TSS region transcription start site region 26232
Tssr26233 2 129307910 to 129307938 28 - TSS region transcription start site region 26233
Tssr26234 2 129309090 to 129309101 11 - TSS region transcription start site region 26234
Tssr26235 2 129309107 to 129309132 25 - TSS region transcription start site region 26235
Tssr26236 2 129309138 to 129309168 30 - TSS region transcription start site region 26236
Tssr26237 2 129309171 to 129309176 5 - TSS region transcription start site region 26237
Tssr26238 2 129309964 to 129309978 14 - TSS region transcription start site region 26238
Tssr20112 2 129310081 to 129310109 28 + TSS region transcription start site region 20112
Tssr26239 2 129310144 to 129310178 34 - TSS region transcription start site region 26239
Tssr20113 2 129314145 to 129314191 46 + TSS region transcription start site region 20113
Gm25703 2 129315329 to 129315479 150 - snRNA gene predicted gene, 25703
Tssr651 2 129315833 to 129315873 40 - TSS region transcription start site region 651
Gm18333 2 129346627 to 129347188 561 - pseudogene predicted gene, 18333
Gm14039 2 129362759 to 129362859 100 - pseudogene predicted gene 14039
Il1b 2 129364570 to 129371139 6569 - protein coding gene interleukin 1 beta
Tssr26240 2 129364705 to 129364728 23 - TSS region transcription start site region 26240
Tssr26241 2 129364742 to 129364778 36 - TSS region transcription start site region 26241
Tssr26242 2 129364799 to 129364807 8 - TSS region transcription start site region 26242
Tssr26243 2 129364811 to 129364816 5 - TSS region transcription start site region 26243
Tssr26244 2 129364832 to 129364860 28 - TSS region transcription start site region 26244
Tssr26245 2 129364898 to 129364941 43 - TSS region transcription start site region 26245
Tssr26246 2 129364978 to 129364992 14 - TSS region transcription start site region 26246
Tssr26247 2 129365002 to 129365025 23 - TSS region transcription start site region 26247
Tssr26248 2 129365054 to 129365071 17 - TSS region transcription start site region 26248
Tssr26249 2 129365111 to 129365160 49 - TSS region transcription start site region 26249
Tssr20114 2 129365145 to 129365164 19 + TSS region transcription start site region 20114
Tssr26250 2 129365180 to 129365200 20 - TSS region transcription start site region 26250
Tssr20115 2 129365191 to 129365210 19 + TSS region transcription start site region 20115
Tssr26251 2 129365226 to 129365242 16 - TSS region transcription start site region 26251
Tssr20116 2 129365950 to 129365959 9 + TSS region transcription start site region 20116
Tssr26252 2 129365951 to 129365963 12 - TSS region transcription start site region 26252
Tssr20117 2 129365963 to 129365996 33 + TSS region transcription start site region 20117
Tssr26253 2 129365977 to 129366101 124 - TSS region transcription start site region 26253
Tssr20118 2 129365999 to 129366008 9 + TSS region transcription start site region 20118
Tssr20119 2 129366032 to 129366058 26 + TSS region transcription start site region 20119
Tssr26254 2 129366107 to 129366118 11 - TSS region transcription start site region 26254
Tssr26255 2 129367231 to 129367243 12 - TSS region transcription start site region 26255
Tssr26256 2 129367266 to 129367411 145 - TSS region transcription start site region 26256
Tssr20120 2 129367268 to 129367290 22 + TSS region transcription start site region 20120
Tssr20121 2 129367301 to 129367325 24 + TSS region transcription start site region 20121
Tssr20122 2 129367351 to 129367363 12 + TSS region transcription start site region 20122
Tssr26257 2 129367428 to 129367439 11 - TSS region transcription start site region 26257
Tssr26258 2 129367985 to 129368006 21 - TSS region transcription start site region 26258
Tssr26259 2 129368008 to 129368125 117 - TSS region transcription start site region 26259
Tssr26260 2 129368130 to 129368162 32 - TSS region transcription start site region 26260
Tssr26261 2 129369723 to 129369761 38 - TSS region transcription start site region 26261
Il1bos 2 129369902 to 129375733 5831 + antisense lncRNA gene interleukin 1 beta, opposite strand
Tssr26262 2 129370307 to 129370354 47 - TSS region transcription start site region 26262
Tssr26263 2 129370373 to 129370386 13 - TSS region transcription start site region 26263
D2Nds3 2 129370826 to 129371085 259 DNA segment DNA segment, Chr 2, Nuffield Department of Surgery 3
Ltpr2a 2 129370826 to 129371085 259 QTL Leishmania tropica response 2a
Ltpr2b 2 129370826 to 129371085 259 QTL Leishmania tropica response 2b
Ltpr2h 2 129370826 to 129371085 259 QTL Leishmania tropica response 2h
D2Mit135 2 129370826 to 129371147 321 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 135
Sluc31 2 129371085 to 74693773 -54677312 QTL susceptibility to lung cancer 31
Tssr26264 2 129371131 to 129371146 15 - TSS region transcription start site region 26264
Tssr20123 2 129371480 to 129371491 11 + TSS region transcription start site region 20123
Tssr20124 2 129371935 to 129371946 11 + TSS region transcription start site region 20124
Spcs2-ps 2 129378271 to 129379396 1125 - pseudogene signal peptidase complex subunit 2, pseudogene
Tssr26265 2 129410386 to 129410399 13 - TSS region transcription start site region 26265
Tssr26266 2 129410455 to 129410465 10 - TSS region transcription start site region 26266
F830045P16Rik 2 129458359 to 129536602 78243 - protein coding gene RIKEN cDNA F830045P16 gene
Tssr26267 2 129478123 to 129478155 32 - TSS region transcription start site region 26267
Tssr20125 2 129490158 to 129490186 28 + TSS region transcription start site region 20125
Gm14040 2 129493570 to 129515807 22237 - sense intronic lncRNA gene predicted gene 14040
Tssr26268 2 129515083 to 129515134 51 - TSS region transcription start site region 26268
Gm14041 2 129565047 to 129566068 1021 - antisense lncRNA gene predicted gene 14041
Cpgi12250 2 129574701 to 129574890 189 CpG island CpG island 12250
Tssr26269 2 129581727 to 129581732 5 - TSS region transcription start site region 26269
Tssr20126 2 129588255 to 129588292 37 + TSS region transcription start site region 20126
Cpgi12251 2 129592508 to 129594261 1753 CpG island CpG island 12251
Tssr26270 2 129592601 to 129592605 4 - TSS region transcription start site region 26270
Tssr20127 2 129592670 to 129592681 11 + TSS region transcription start site region 20127
Tssr20128 2 129592792 to 129592803 11 + TSS region transcription start site region 20128
Tssr20129 2 129592818 to 129592885 67 + TSS region transcription start site region 20129
Sirpa 2 129592835 to 129632228 39393 + protein coding gene signal-regulatory protein alpha
Tssr20130 2 129592922 to 129592940 18 + TSS region transcription start site region 20130
Tssr20131 2 129592966 to 129592986 20 + TSS region transcription start site region 20131
Tssr20132 2 129593003 to 129593031 28 + TSS region transcription start site region 20132
Tssr20133 2 129593032 to 129593046 14 + TSS region transcription start site region 20133
Tssr20134 2 129593049 to 129593058 9 + TSS region transcription start site region 20134
Tssr20135 2 129593095 to 129593127 32 + TSS region transcription start site region 20135
Tssr20136 2 129593136 to 129593147 11 + TSS region transcription start site region 20136
Tssr20137 2 129593205 to 129593221 16 + TSS region transcription start site region 20137
Tssr20138 2 129593234 to 129593258 24 + TSS region transcription start site region 20138
Tssr20139 2 129593360 to 129593377 17 + TSS region transcription start site region 20139
Tssr20140 2 129593382 to 129593414 32 + TSS region transcription start site region 20140
Tssr20141 2 129593422 to 129593436 14 + TSS region transcription start site region 20141
Tssr20142 2 129593528 to 129593600 72 + TSS region transcription start site region 20142
Tssr26271 2 129593941 to 129593948 7 - TSS region transcription start site region 26271
Tssr26272 2 129595662 to 129595725 63 - TSS region transcription start site region 26272
Tssr20143 2 129596187 to 129596238 51 + TSS region transcription start site region 20143
2900076A13Rik 2 129596354 to 129597218 864 unclassified gene RIKEN cDNA 2900076A13 gene
Tssr20144 2 129601514 to 129601542 28 + TSS region transcription start site region 20144
Tssr20145 2 129602201 to 129602217 16 + TSS region transcription start site region 20145
Tssr20146 2 129603730 to 129603744 14 + TSS region transcription start site region 20146