Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 2:128917402-129068563

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30 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr20090 2 128924904 to 128924905 1 + TSS region transcription start site region 20090
Gm22859 2 128925571 to 128925692 121 - miRNA gene predicted gene, 22859
Zc3h8 2 128926268 to 128944077 17809 - protein coding gene zinc finger CCCH type containing 8
Cpgi12241 2 128943528 to 128944321 793 CpG island CpG island 12241
Tssr26177 2 128943960 to 128943976 16 - TSS region transcription start site region 26177
Tssr26178 2 128943985 to 128944034 49 - TSS region transcription start site region 26178
Gm14028 2 128952972 to 128953450 478 - pseudogene predicted gene 14028
4933427J07Rik 2 128955671 to 128957861 2190 - lncRNA gene RIKEN cDNA 4933427J07 gene
Gm10762 2 128965505 to 128968044 2539 - lncRNA gene predicted gene 10762
Cpgi12242 2 128966957 to 128968571 1614 CpG island CpG island 12242
Tssr26179 2 128967233 to 128967262 29 - TSS region transcription start site region 26179
Tssr20091 2 128967349 to 128967380 31 + TSS region transcription start site region 20091
Tssr20092 2 128967383 to 128967443 60 + TSS region transcription start site region 20092
Zc3h6 2 128967402 to 129018563 51161 + protein coding gene zinc finger CCCH type containing 6
Tssr20093 2 128967778 to 128967811 33 + TSS region transcription start site region 20093
Tssr26180 2 128967996 to 128968030 34 - TSS region transcription start site region 26180
Tssr26181 2 128968043 to 128968064 21 - TSS region transcription start site region 26181
Tssr26182 2 128968225 to 128968241 16 - TSS region transcription start site region 26182
Gm14027 2 129016952 to 129021756 4804 + lncRNA gene predicted gene 14027
Tssr26183 2 129019684 to 129019687 3 - TSS region transcription start site region 26183
Vinac1 2 129025073 to 129048172 23099 - protein coding gene vinculin/alpha-catenin family member 1
4930402C16Rik 2 129038545 to 129039979 1434 lncRNA gene RIKEN cDNA 4930402C16 gene
Cpgi12243 2 129038708 to 129039668 960 CpG island CpG island 12243
Tssr26184 2 129055810 to 129055817 7 - TSS region transcription start site region 26184
Gm14022 2 129060946 to 129065686 4740 - lncRNA gene predicted gene 14022
Cpgi12244 2 129065347 to 129066608 1261 CpG island CpG island 12244
Tssr26185 2 129065900 to 129065916 16 - TSS region transcription start site region 26185
Tssr20094 2 129065934 to 129065994 60 + TSS region transcription start site region 20094
Ttl 2 129065947 to 129096283 30336 + protein coding gene tubulin tyrosine ligase
Tssr20095 2 129066003 to 129066015 12 + TSS region transcription start site region 20095