Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:128461515-128745384

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm36154 2 128430437 to 128466515 36078 - lncRNA gene predicted gene, 36154
Tssr26170 2 128466468 to 128466478 10 - TSS region transcription start site region 26170
Tssr26171 2 128467513 to 128467522 9 - TSS region transcription start site region 26171
Tssr26172 2 128467525 to 128467531 6 - TSS region transcription start site region 26172
Gm39928 2 128490600 to 128549717 59117 - lncRNA gene predicted gene, 39928
Gm39927 2 128520024 to 128521888 1864 - lncRNA gene predicted gene, 39927
Gm14006 2 128557254 to 128558234 980 - pseudogene predicted gene 14006
Gm36203 2 128570156 to 128591162 21006 - lncRNA gene predicted gene, 36203
Gm14008 2 128587895 to 128588168 273 - pseudogene predicted gene 14008
Tssr20058 2 128591205 to 128591223 18 + TSS region transcription start site region 20058
Spdye4c 2 128591209 to 128598464 7255 + protein coding gene speedy/RINGO cell cycle regulator family, member E4C
Tssr20059 2 128591233 to 128591244 11 + TSS region transcription start site region 20059
Gm39929 2 128601515 to 128605384 3869 - lincRNA gene predicted gene, 39929
Gm14007 2 128606985 to 128607194 209 + pseudogene predicted gene 14007
Anapc1 2 128610104 to 128687391 77287 - protein coding gene anaphase promoting complex subunit 1
Cpgi12236 2 128686650 to 128687552 902 CpG island CpG island 12236
Tssr26173 2 128687357 to 128687396 39 - TSS region transcription start site region 26173
Tssr26174 2 128687400 to 128687411 11 - TSS region transcription start site region 26174
Gm39931 2 128687756 to 128698922 11166 - lncRNA gene predicted gene, 39931
Cpgi12237 2 128698725 to 128699612 887 CpG island CpG island 12237
Tssr20060 2 128698822 to 128698833 11 + TSS region transcription start site region 20060
Tssr20061 2 128698865 to 128698897 32 + TSS region transcription start site region 20061
Tssr20062 2 128698903 to 128698924 21 + TSS region transcription start site region 20062
Mertk 2 128698956 to 128802894 103938 + protein coding gene MER proto-oncogene tyrosine kinase
Tssr20063 2 128704801 to 128704819 18 + TSS region transcription start site region 20063
Tssr20064 2 128708716 to 128708734 18 + TSS region transcription start site region 20064
Tssr20065 2 128708756 to 128708783 27 + TSS region transcription start site region 20065
D2Mit305.1 2 128709021 to 128709130 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 305.1
Tssr20066 2 128709055 to 128709065 10 + TSS region transcription start site region 20066
Tssr20067 2 128709091 to 128709107 16 + TSS region transcription start site region 20067
D2Mit305 2 128709108 to 128709243 135 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 305
Chab1 2 128709108 to 128709243 135 QTL cholesterol absorption 1
Tssr20068 2 128729291 to 128729305 14 + TSS region transcription start site region 20068
Tssr20069 2 128738266 to 128738277 11 + TSS region transcription start site region 20069