Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:126700366-127120387

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12208 2 126706996 to 126707780 784 CpG island CpG island 12208
Tssr19966 2 126707183 to 126707235 52 + TSS region transcription start site region 19966
Tssr19967 2 126707319 to 126707411 92 + TSS region transcription start site region 19967
Usp8 2 126707328 to 126759297 51969 + protein coding gene ubiquitin specific peptidase 8
Tssr19968 2 126707412 to 126707423 11 + TSS region transcription start site region 19968
Gm10774 2 126709354 to 126709557 203 - pseudogene predicted pseudogene 10774
Tssr19969 2 126718041 to 126718058 17 + TSS region transcription start site region 19969
Tssr19970 2 126735972 to 126735978 6 + TSS region transcription start site region 19970
Tssr19971 2 126738008 to 126738047 39 + TSS region transcription start site region 19971
Tssr19972 2 126758696 to 126758732 36 + TSS region transcription start site region 19972
Usp50 2 126761050 to 126783460 22410 - protein coding gene ubiquitin specific peptidase 50
Tssr26065 2 126783416 to 126783452 36 - TSS region transcription start site region 26065
Trpm7 2 126791565 to 126876230 84665 - protein coding gene transient receptor potential cation channel, subfamily M, member 7
Tssr26066 2 126797810 to 126797826 16 - TSS region transcription start site region 26066
Tssr26067 2 126810238 to 126810241 3 - TSS region transcription start site region 26067
Tssr26068 2 126863270 to 126863274 4 - TSS region transcription start site region 26068
Gm14212 2 126864503 to 126865328 825 + pseudogene predicted gene 14212
Cpgi12209 2 126875323 to 126876603 1280 CpG island CpG island 12209
Tssr26069 2 126876149 to 126876171 22 - TSS region transcription start site region 26069
Tssr26070 2 126876179 to 126876205 26 - TSS region transcription start site region 26070
Tssr26071 2 126876209 to 126876267 58 - TSS region transcription start site region 26071
Gm19213 2 126881642 to 126882276 634 + pseudogene predicted gene, 19213
Sppl2a 2 126890391 to 126933235 42844 - protein coding gene signal peptide peptidase like 2A
Tssr26072 2 126890702 to 126890725 23 - TSS region transcription start site region 26072
Tssr26073 2 126890877 to 126890896 19 - TSS region transcription start site region 26073
Tssr26074 2 126890955 to 126890972 17 - TSS region transcription start site region 26074
Tssr26075 2 126890976 to 126890987 11 - TSS region transcription start site region 26075
Tssr26076 2 126892383 to 126892408 25 - TSS region transcription start site region 26076
Tssr26077 2 126894102 to 126894105 3 - TSS region transcription start site region 26077
Tssr26078 2 126897679 to 126897680 1 - TSS region transcription start site region 26078
Mir3473g 2 126902250 to 126902385 135 - miRNA gene microRNA 3473g
Gm46761 2 126909842 to 126910799 957 + pseudogene predicted gene, 46761
Tssr26079 2 126910366 to 126910387 21 - TSS region transcription start site region 26079
Tssr19973 2 126910374 to 126910376 2 + TSS region transcription start site region 19973
Tssr26080 2 126913103 to 126913122 19 - TSS region transcription start site region 26080
Tssr26081 2 126925804 to 126925815 11 - TSS region transcription start site region 26081
Tssr26082 2 126925827 to 126925838 11 - TSS region transcription start site region 26082
Tssr26083 2 126926845 to 126926865 20 - TSS region transcription start site region 26083
Tssr19974 2 126929025 to 126929030 5 + TSS region transcription start site region 19974
Tssr26084 2 126931901 to 126931906 5 - TSS region transcription start site region 26084
Cpgi12210 2 126932767 to 126933404 637 CpG island CpG island 12210
Tssr26085 2 126932993 to 126933090 97 - TSS region transcription start site region 26085
Tssr26086 2 126933122 to 126933133 11 - TSS region transcription start site region 26086
Tssr26087 2 126933153 to 126933164 11 - TSS region transcription start site region 26087
Tssr26088 2 126933215 to 126933227 12 - TSS region transcription start site region 26088
Tssr26089 2 126933229 to 126933241 12 - TSS region transcription start site region 26089
Tssr26090 2 126933867 to 126933880 13 - TSS region transcription start site region 26090
Tssr26091 2 126941988 to 126941993 5 - TSS region transcription start site region 26091
Cpgi12211 2 127004541 to 127004766 225 CpG island CpG island 12211
Cpgi12212 2 127008542 to 127009085 543 CpG island CpG island 12212
Tssr19975 2 127008711 to 127008756 45 + TSS region transcription start site region 19975
Ap4e1 2 127008717 to 127067909 59192 + protein coding gene adaptor-related protein complex AP-4, epsilon 1
Gm24081 2 127040561 to 127040685 124 + miRNA gene predicted gene, 24081
Cpgi12213 2 127070488 to 127070876 388 CpG island CpG island 12213
Tssr19976 2 127070646 to 127070709 63 + TSS region transcription start site region 19976
Blvra 2 127070665 to 127097084 26419 + protein coding gene biliverdin reductase A
Tssr19977 2 127078920 to 127078925 5 + TSS region transcription start site region 19977
Tssr19978 2 127080192 to 127080211 19 + TSS region transcription start site region 19978
Tssr19979 2 127080237 to 127080248 11 + TSS region transcription start site region 19979
Tssr19980 2 127080252 to 127080262 10 + TSS region transcription start site region 19980
Tssr19981 2 127080469 to 127080497 28 + TSS region transcription start site region 19981
Tssr19982 2 127080511 to 127080530 19 + TSS region transcription start site region 19982
Tssr19983 2 127080569 to 127080580 11 + TSS region transcription start site region 19983
Tssr19984 2 127081556 to 127081560 4 + TSS region transcription start site region 19984
Tssr19985 2 127083382 to 127083398 16 + TSS region transcription start site region 19985
Tssr19986 2 127086454 to 127086490 36 + TSS region transcription start site region 19986
Tssr19987 2 127087489 to 127087497 8 + TSS region transcription start site region 19987
Gm31414 2 127092320 to 127094324 2004 - pseudogene predicted gene, 31414
Gm39922 2 127098657 to 127103693 5036 + lncRNA gene predicted gene, 39922
Ncaph 2 127103809 to 127133954 30145 - protein coding gene non-SMC condensin I complex, subunit H