Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:126575238-127045241

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99 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc27a2 2 126553024 to 126588243 35219 + protein coding gene solute carrier family 27 (fatty acid transporter), member 2
Tssr19948 2 126576799 to 126576810 11 + TSS region transcription start site region 19948
Tssr19949 2 126577834 to 126577845 11 + TSS region transcription start site region 19949
Tssr19950 2 126587813 to 126587823 10 + TSS region transcription start site region 19950
Tssr19951 2 126588095 to 126588109 14 + TSS region transcription start site region 19951
Hdc 2 126593667 to 126619299 25632 - protein coding gene histidine decarboxylase
Tssr19952 2 126597657 to 126597692 35 + TSS region transcription start site region 19952
Tssr26048 2 126598014 to 126598020 6 - TSS region transcription start site region 26048
Tssr26049 2 126598033 to 126598047 14 - TSS region transcription start site region 26049
Tssr26050 2 126598053 to 126598065 12 - TSS region transcription start site region 26050
Tssr26051 2 126600569 to 126600595 26 - TSS region transcription start site region 26051
Tssr634 2 126602270 to 126602280 10 - TSS region transcription start site region 634
Tssr26052 2 126602298 to 126602310 12 - TSS region transcription start site region 26052
Tssr19953 2 126602477 to 126602487 10 + TSS region transcription start site region 19953
Tssr19954 2 126602501 to 126602512 11 + TSS region transcription start site region 19954
Tssr635 2 126606153 to 126606166 13 - TSS region transcription start site region 635
Tssr26053 2 126606172 to 126606183 11 - TSS region transcription start site region 26053
Tssr19955 2 126606411 to 126606423 12 + TSS region transcription start site region 19955
Tssr19956 2 126606430 to 126606442 12 + TSS region transcription start site region 19956
Tssr19957 2 126606660 to 126606670 10 + TSS region transcription start site region 19957
Tssr26054 2 126607604 to 126607612 8 - TSS region transcription start site region 26054
Tssr19958 2 126607728 to 126607739 11 + TSS region transcription start site region 19958
Tssr19959 2 126607752 to 126607807 55 + TSS region transcription start site region 19959
D2Mit256 2 126616674 to 126616816 142 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 256
Tssr26055 2 126618655 to 126618671 16 - TSS region transcription start site region 26055
Gabpb1 2 126628907 to 126676551 47644 - protein coding gene GA repeat binding protein, beta 1
Gm23753 2 126634539 to 126634687 148 - snRNA gene predicted gene, 23753
Tssr19960 2 126637095 to 126637098 3 + TSS region transcription start site region 19960
Gm18720 2 126643141 to 126645962 2821 - pseudogene predicted gene, 18720
A630026N12Rik 2 126669927 to 126672196 2269 unclassified gene RIKEN cDNA A630026N12 gene
Tssr26056 2 126670675 to 126670680 5 - TSS region transcription start site region 26056
Tssr19961 2 126673596 to 126673606 10 + TSS region transcription start site region 19961
Tssr19962 2 126673649 to 126673659 10 + TSS region transcription start site region 19962
Cpgi12207 2 126674544 to 126676256 1712 CpG island CpG island 12207
Tssr19963 2 126674642 to 126674646 4 + TSS region transcription start site region 19963
Tssr26057 2 126675195 to 126675217 22 - TSS region transcription start site region 26057
Tssr26058 2 126675224 to 126675268 44 - TSS region transcription start site region 26058
Tssr19964 2 126675297 to 126675347 50 + TSS region transcription start site region 19964
Tssr26059 2 126675448 to 126675460 12 - TSS region transcription start site region 26059
Tssr26060 2 126675461 to 126675509 48 - TSS region transcription start site region 26060
Tssr26061 2 126675517 to 126675532 15 - TSS region transcription start site region 26061
Tssr26062 2 126675538 to 126675572 34 - TSS region transcription start site region 26062
Tssr19965 2 126675898 to 126675910 12 + TSS region transcription start site region 19965
Gm27003 2 126675916 to 126683805 7889 + antisense lncRNA gene predicted gene, 27003
Tssr26063 2 126676063 to 126676096 33 - TSS region transcription start site region 26063
Tssr26064 2 126676111 to 126676140 29 - TSS region transcription start site region 26064
Cpgi12208 2 126706996 to 126707780 784 CpG island CpG island 12208
Tssr19966 2 126707183 to 126707235 52 + TSS region transcription start site region 19966
Tssr19967 2 126707319 to 126707411 92 + TSS region transcription start site region 19967
Usp8 2 126707328 to 126759297 51969 + protein coding gene ubiquitin specific peptidase 8
Tssr19968 2 126707412 to 126707423 11 + TSS region transcription start site region 19968
Gm10774 2 126709354 to 126709557 203 - pseudogene predicted pseudogene 10774
Tssr19969 2 126718041 to 126718058 17 + TSS region transcription start site region 19969
Tssr19970 2 126735972 to 126735978 6 + TSS region transcription start site region 19970
Tssr19971 2 126738008 to 126738047 39 + TSS region transcription start site region 19971
Tssr19972 2 126758696 to 126758732 36 + TSS region transcription start site region 19972
Usp50 2 126761050 to 126783460 22410 - protein coding gene ubiquitin specific peptidase 50
Tssr26065 2 126783416 to 126783452 36 - TSS region transcription start site region 26065
Trpm7 2 126791565 to 126876230 84665 - protein coding gene transient receptor potential cation channel, subfamily M, member 7
Tssr26066 2 126797810 to 126797826 16 - TSS region transcription start site region 26066
Tssr26067 2 126810238 to 126810241 3 - TSS region transcription start site region 26067
Tssr26068 2 126863270 to 126863274 4 - TSS region transcription start site region 26068
Gm14212 2 126864503 to 126865328 825 + pseudogene predicted gene 14212
Cpgi12209 2 126875323 to 126876603 1280 CpG island CpG island 12209
Tssr26069 2 126876149 to 126876171 22 - TSS region transcription start site region 26069
Tssr26070 2 126876179 to 126876205 26 - TSS region transcription start site region 26070
Tssr26071 2 126876209 to 126876267 58 - TSS region transcription start site region 26071
Gm19213 2 126881642 to 126882276 634 + pseudogene predicted gene, 19213
Sppl2a 2 126890391 to 126933235 42844 - protein coding gene signal peptide peptidase like 2A
Tssr26072 2 126890702 to 126890725 23 - TSS region transcription start site region 26072
Tssr26073 2 126890877 to 126890896 19 - TSS region transcription start site region 26073
Tssr26074 2 126890955 to 126890972 17 - TSS region transcription start site region 26074
Tssr26075 2 126890976 to 126890987 11 - TSS region transcription start site region 26075
Tssr26076 2 126892383 to 126892408 25 - TSS region transcription start site region 26076
Tssr26077 2 126894102 to 126894105 3 - TSS region transcription start site region 26077
Tssr26078 2 126897679 to 126897680 1 - TSS region transcription start site region 26078
Mir3473g 2 126902250 to 126902385 135 - miRNA gene microRNA 3473g
Gm46761 2 126909842 to 126910799 957 + pseudogene predicted gene, 46761
Tssr26079 2 126910366 to 126910387 21 - TSS region transcription start site region 26079
Tssr19973 2 126910374 to 126910376 2 + TSS region transcription start site region 19973
Tssr26080 2 126913103 to 126913122 19 - TSS region transcription start site region 26080
Tssr26081 2 126925804 to 126925815 11 - TSS region transcription start site region 26081
Tssr26082 2 126925827 to 126925838 11 - TSS region transcription start site region 26082
Tssr26083 2 126926845 to 126926865 20 - TSS region transcription start site region 26083
Tssr19974 2 126929025 to 126929030 5 + TSS region transcription start site region 19974
Tssr26084 2 126931901 to 126931906 5 - TSS region transcription start site region 26084
Cpgi12210 2 126932767 to 126933404 637 CpG island CpG island 12210
Tssr26085 2 126932993 to 126933090 97 - TSS region transcription start site region 26085
Tssr26086 2 126933122 to 126933133 11 - TSS region transcription start site region 26086
Tssr26087 2 126933153 to 126933164 11 - TSS region transcription start site region 26087
Tssr26088 2 126933215 to 126933227 12 - TSS region transcription start site region 26088
Tssr26089 2 126933229 to 126933241 12 - TSS region transcription start site region 26089
Tssr26090 2 126933867 to 126933880 13 - TSS region transcription start site region 26090
Tssr26091 2 126941988 to 126941993 5 - TSS region transcription start site region 26091
Cpgi12211 2 127004541 to 127004766 225 CpG island CpG island 12211
Cpgi12212 2 127008542 to 127009085 543 CpG island CpG island 12212
Tssr19975 2 127008711 to 127008756 45 + TSS region transcription start site region 19975
Ap4e1 2 127008717 to 127067909 59192 + protein coding gene adaptor-related protein complex AP-4, epsilon 1
Gm24081 2 127040561 to 127040685 124 + miRNA gene predicted gene, 24081