Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:126548041-126888058

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12206 2 126552483 to 126553745 1262 CpG island CpG island 12206
Tssr19938 2 126552735 to 126552747 12 + TSS region transcription start site region 19938
Tssr19939 2 126552757 to 126552768 11 + TSS region transcription start site region 19939
Tssr19940 2 126552811 to 126552820 9 + TSS region transcription start site region 19940
Tssr19941 2 126552836 to 126552893 57 + TSS region transcription start site region 19941
Tssr19942 2 126552904 to 126552915 11 + TSS region transcription start site region 19942
Tssr19943 2 126553015 to 126553033 18 + TSS region transcription start site region 19943
Slc27a2 2 126553024 to 126588243 35219 + protein coding gene solute carrier family 27 (fatty acid transporter), member 2
Tssr26047 2 126553262 to 126553271 9 - TSS region transcription start site region 26047
Tssr19944 2 126553580 to 126553598 18 + TSS region transcription start site region 19944
Tssr633 2 126556522 to 126556532 10 + TSS region transcription start site region 633
Tssr19945 2 126561662 to 126561700 38 + TSS region transcription start site region 19945
Tssr19946 2 126567743 to 126567754 11 + TSS region transcription start site region 19946
Tssr19947 2 126568401 to 126568408 7 + TSS region transcription start site region 19947
Tssr19948 2 126576799 to 126576810 11 + TSS region transcription start site region 19948
Tssr19949 2 126577834 to 126577845 11 + TSS region transcription start site region 19949
Tssr19950 2 126587813 to 126587823 10 + TSS region transcription start site region 19950
Tssr19951 2 126588095 to 126588109 14 + TSS region transcription start site region 19951
Hdc 2 126593667 to 126619299 25632 - protein coding gene histidine decarboxylase
Tssr19952 2 126597657 to 126597692 35 + TSS region transcription start site region 19952
Tssr26048 2 126598014 to 126598020 6 - TSS region transcription start site region 26048
Tssr26049 2 126598033 to 126598047 14 - TSS region transcription start site region 26049
Tssr26050 2 126598053 to 126598065 12 - TSS region transcription start site region 26050
Tssr26051 2 126600569 to 126600595 26 - TSS region transcription start site region 26051
Tssr634 2 126602270 to 126602280 10 - TSS region transcription start site region 634
Tssr26052 2 126602298 to 126602310 12 - TSS region transcription start site region 26052
Tssr19953 2 126602477 to 126602487 10 + TSS region transcription start site region 19953
Tssr19954 2 126602501 to 126602512 11 + TSS region transcription start site region 19954
Tssr635 2 126606153 to 126606166 13 - TSS region transcription start site region 635
Tssr26053 2 126606172 to 126606183 11 - TSS region transcription start site region 26053
Tssr19955 2 126606411 to 126606423 12 + TSS region transcription start site region 19955
Tssr19956 2 126606430 to 126606442 12 + TSS region transcription start site region 19956
Tssr19957 2 126606660 to 126606670 10 + TSS region transcription start site region 19957
Tssr26054 2 126607604 to 126607612 8 - TSS region transcription start site region 26054
Tssr19958 2 126607728 to 126607739 11 + TSS region transcription start site region 19958
Tssr19959 2 126607752 to 126607807 55 + TSS region transcription start site region 19959
D2Mit256 2 126616674 to 126616816 142 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 256
Tssr26055 2 126618655 to 126618671 16 - TSS region transcription start site region 26055
Gabpb1 2 126628907 to 126676551 47644 - protein coding gene GA repeat binding protein, beta 1
Gm23753 2 126634539 to 126634687 148 - snRNA gene predicted gene, 23753
Tssr19960 2 126637095 to 126637098 3 + TSS region transcription start site region 19960
Gm18720 2 126643141 to 126645962 2821 - pseudogene predicted gene, 18720
A630026N12Rik 2 126669927 to 126672196 2269 unclassified gene RIKEN cDNA A630026N12 gene
Tssr26056 2 126670675 to 126670680 5 - TSS region transcription start site region 26056
Tssr19961 2 126673596 to 126673606 10 + TSS region transcription start site region 19961
Tssr19962 2 126673649 to 126673659 10 + TSS region transcription start site region 19962
Cpgi12207 2 126674544 to 126676256 1712 CpG island CpG island 12207
Tssr19963 2 126674642 to 126674646 4 + TSS region transcription start site region 19963
Tssr26057 2 126675195 to 126675217 22 - TSS region transcription start site region 26057
Tssr26058 2 126675224 to 126675268 44 - TSS region transcription start site region 26058
Tssr19964 2 126675297 to 126675347 50 + TSS region transcription start site region 19964
Tssr26059 2 126675448 to 126675460 12 - TSS region transcription start site region 26059
Tssr26060 2 126675461 to 126675509 48 - TSS region transcription start site region 26060
Tssr26061 2 126675517 to 126675532 15 - TSS region transcription start site region 26061
Tssr26062 2 126675538 to 126675572 34 - TSS region transcription start site region 26062
Tssr19965 2 126675898 to 126675910 12 + TSS region transcription start site region 19965
Gm27003 2 126675916 to 126683805 7889 + antisense lncRNA gene predicted gene, 27003
Tssr26063 2 126676063 to 126676096 33 - TSS region transcription start site region 26063
Tssr26064 2 126676111 to 126676140 29 - TSS region transcription start site region 26064
Cpgi12208 2 126706996 to 126707780 784 CpG island CpG island 12208
Tssr19966 2 126707183 to 126707235 52 + TSS region transcription start site region 19966
Tssr19967 2 126707319 to 126707411 92 + TSS region transcription start site region 19967
Usp8 2 126707328 to 126759297 51969 + protein coding gene ubiquitin specific peptidase 8
Tssr19968 2 126707412 to 126707423 11 + TSS region transcription start site region 19968
Gm10774 2 126709354 to 126709557 203 - pseudogene predicted pseudogene 10774
Tssr19969 2 126718041 to 126718058 17 + TSS region transcription start site region 19969
Tssr19970 2 126735972 to 126735978 6 + TSS region transcription start site region 19970
Tssr19971 2 126738008 to 126738047 39 + TSS region transcription start site region 19971
Tssr19972 2 126758696 to 126758732 36 + TSS region transcription start site region 19972
Usp50 2 126761050 to 126783460 22410 - protein coding gene ubiquitin specific peptidase 50
Tssr26065 2 126783416 to 126783452 36 - TSS region transcription start site region 26065
Trpm7 2 126791565 to 126876230 84665 - protein coding gene transient receptor potential cation channel, subfamily M, member 7
Tssr26066 2 126797810 to 126797826 16 - TSS region transcription start site region 26066
Tssr26067 2 126810238 to 126810241 3 - TSS region transcription start site region 26067
Tssr26068 2 126863270 to 126863274 4 - TSS region transcription start site region 26068
Gm14212 2 126864503 to 126865328 825 + pseudogene predicted gene 14212
Cpgi12209 2 126875323 to 126876603 1280 CpG island CpG island 12209
Tssr26069 2 126876149 to 126876171 22 - TSS region transcription start site region 26069
Tssr26070 2 126876179 to 126876205 26 - TSS region transcription start site region 26070
Tssr26071 2 126876209 to 126876267 58 - TSS region transcription start site region 26071
Gm19213 2 126881642 to 126882276 634 + pseudogene predicted gene, 19213