MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:125657933-125729813

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
pta	2	119524913 to 125725738	6200825		heritable phenotypic marker	persistent truncus arteriosus
Shc4	2	125627447 to 125724148	96701	-	protein coding gene	SHC (Src homology 2 domain containing) family, member 4
Cpgi12198	2	125660844 to 125661078	234		CpG island	CpG island 12198
D2Mit105	2	125665713 to 125665820	107		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 105
Cpgi12199	2	125672655 to 125673710	1055		CpG island	CpG island 12199
Tssr19899	2	125673077 to 125673133	56	+	TSS region	transcription start site region 19899
Eid1	2	125673095 to 125674785	1690	+	protein coding gene	EP300 interacting inhibitor of differentiation 1
Tssr19900	2	125673149 to 125673184	35	+	TSS region	transcription start site region 19900
Tssr19901	2	125673683 to 125673694	11	+	TSS region	transcription start site region 19901
Tssr19902	2	125674054 to 125674074	20	+	TSS region	transcription start site region 19902
Gm35231	2	125692933 to 125694813	1880	+	lncRNA gene	predicted gene, 35231
Cpgi12200	2	125723069 to 125723634	565		CpG island	CpG island 12200
Tssr26008	2	125723524 to 125723537	13	-	TSS region	transcription start site region 26008
Tssr26009	2	125723657 to 125723691	34	-	TSS region	transcription start site region 26009
Tssr26010	2	125723707 to 125723723	16	-	TSS region	transcription start site region 26010
D2Mit398	2	125725594 to 125725738	144		DNA segment	DNA segment, Chr 2, Massachusetts Institute of Technology 398
D2Dcr70	2	125725636 to 125725735	99		DNA segment	DNA Segment, Chr 2, Derry C. Roopenian 70