Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:125240089-125772881

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
pta 2 119524913 to 125725738 6200825 heritable phenotypic marker persistent truncus arteriosus
Cpgi12195 2 125247102 to 125248138 1036 CpG island CpG island 12195
Dut 2 125247190 to 125258608 11418 + protein coding gene deoxyuridine triphosphatase
Tssr19894 2 125247226 to 125247287 61 + TSS region transcription start site region 19894
Tssr19895 2 125247709 to 125247743 34 + TSS region transcription start site region 19895
Tssr19896 2 125256434 to 125256445 11 + TSS region transcription start site region 19896
Tssr19897 2 125256470 to 125256476 6 + TSS region transcription start site region 19897
A530010F05Rik 2 125274564 to 125277172 2608 + antisense lncRNA gene RIKEN cDNA A530010F05 gene
Gm14003 2 125282688 to 125283978 1290 - lincRNA gene predicted gene 14003
Fbn1 2 125300594 to 125506485 205891 - protein coding gene fibrillin 1
Tssr25999 2 125301723 to 125301736 13 - TSS region transcription start site region 25999
D2Mit459 2 125365310 to 125365429 119 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 459
Tssr26000 2 125397811 to 125397842 31 - TSS region transcription start site region 26000
Gm9913 2 125505089 to 125507881 2792 + protein coding gene predicted gene 9913
Cpgi12196 2 125505221 to 125507031 1810 CpG island CpG island 12196
Tssr26001 2 125505937 to 125505944 7 - TSS region transcription start site region 26001
Tssr26002 2 125505957 to 125505977 20 - TSS region transcription start site region 26002
Tssr26003 2 125506023 to 125506047 24 - TSS region transcription start site region 26003
Tssr26004 2 125506052 to 125506084 32 - TSS region transcription start site region 26004
Tssr26005 2 125506395 to 125506408 13 - TSS region transcription start site region 26005
Tssr26006 2 125506419 to 125506445 26 - TSS region transcription start site region 26006
Cep152 2 125563088 to 125625113 62025 - protein coding gene centrosomal protein 152
Gm35029 2 125590246 to 125594940 4694 + lncRNA gene predicted gene, 35029
Tssr19898 2 125591641 to 125591656 15 + TSS region transcription start site region 19898
Gm34949 2 125596702 to 125598119 1417 + pseudogene predicted gene, 34949
Cpgi12197 2 125624773 to 125625392 619 CpG island CpG island 12197
Tssr26007 2 125625065 to 125625123 58 - TSS region transcription start site region 26007
Shc4 2 125627447 to 125724148 96701 - protein coding gene SHC (Src homology 2 domain containing) family, member 4
Cpgi12198 2 125660844 to 125661078 234 CpG island CpG island 12198
D2Mit105 2 125665713 to 125665820 107 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 105
Cpgi12199 2 125672655 to 125673710 1055 CpG island CpG island 12199
Tssr19899 2 125673077 to 125673133 56 + TSS region transcription start site region 19899
Eid1 2 125673095 to 125674785 1690 + protein coding gene EP300 interacting inhibitor of differentiation 1
Tssr19900 2 125673149 to 125673184 35 + TSS region transcription start site region 19900
Tssr19901 2 125673683 to 125673694 11 + TSS region transcription start site region 19901
Tssr19902 2 125674054 to 125674074 20 + TSS region transcription start site region 19902
Gm35231 2 125692933 to 125694813 1880 + lncRNA gene predicted gene, 35231
Cpgi12200 2 125723069 to 125723634 565 CpG island CpG island 12200
Tssr26008 2 125723524 to 125723537 13 - TSS region transcription start site region 26008
Tssr26009 2 125723657 to 125723691 34 - TSS region transcription start site region 26009
Tssr26010 2 125723707 to 125723723 16 - TSS region transcription start site region 26010
D2Mit398 2 125725594 to 125725738 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 398
D2Dcr70 2 125725636 to 125725735 99 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 70
Cpgi12201 2 125731797 to 125732134 337 CpG island CpG island 12201
BC026863 2 125732165 to 125733495 1330 unclassified gene cDNA sequence BC026863
Secisbp2l 2 125736986 to 125782870 45884 - protein coding gene SECIS binding protein 2-like
Tssr26011 2 125737885 to 125737890 5 - TSS region transcription start site region 26011
Tssr26012 2 125760382 to 125760403 21 - TSS region transcription start site region 26012
Tssr26013 2 125767984 to 125767988 4 - TSS region transcription start site region 26013
D2Dcr71 2 125772560 to 125772658 98 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 71