MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 2:125192709-125302743

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cfq7	2	118526291 to 125206952	6680661		QTL	conditioned fear QTL 7
Slc12a1	2	125152600 to 125230002	77402	+	protein coding gene	solute carrier family 12, member 1
Gm46760	2	125195148 to 125203407	8259	-	lncRNA gene	predicted gene, 46760
Gm14002	2	125207529 to 125217512	9983	-	antisense lncRNA gene	predicted gene 14002
Tssr19890	2	125218139 to 125218146	7	+	TSS region	transcription start site region 19890
Tssr19891	2	125229441 to 125229453	12	+	TSS region	transcription start site region 19891
Tssr19892	2	125229552 to 125229561	9	+	TSS region	transcription start site region 19892
Tssr19893	2	125235852 to 125235854	2	+	TSS region	transcription start site region 19893
Cpgi12195	2	125247102 to 125248138	1036		CpG island	CpG island 12195
Dut	2	125247190 to 125258608	11418	+	protein coding gene	deoxyuridine triphosphatase
Tssr19894	2	125247226 to 125247287	61	+	TSS region	transcription start site region 19894
Tssr19895	2	125247709 to 125247743	34	+	TSS region	transcription start site region 19895
Tssr19896	2	125256434 to 125256445	11	+	TSS region	transcription start site region 19896
Tssr19897	2	125256470 to 125256476	6	+	TSS region	transcription start site region 19897
A530010F05Rik	2	125274564 to 125277172	2608	+	antisense lncRNA gene	RIKEN cDNA A530010F05 gene
Gm14003	2	125282688 to 125283978	1290	-	lincRNA gene	predicted gene 14003
Fbn1	2	125300594 to 125506485	205891	-	protein coding gene	fibrillin 1
Tssr25999	2	125301723 to 125301736	13	-	TSS region	transcription start site region 25999