Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:125187688-125378978

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq7 2 118526291 to 125206952 6680661 QTL conditioned fear QTL 7
Slc12a1 2 125152600 to 125230002 77402 + protein coding gene solute carrier family 12, member 1
Tssr19889 2 125188980 to 125188987 7 + TSS region transcription start site region 19889
Gm46760 2 125195148 to 125203407 8259 - lncRNA gene predicted gene, 46760
Gm14002 2 125207529 to 125217512 9983 - antisense lncRNA gene predicted gene 14002
Tssr19890 2 125218139 to 125218146 7 + TSS region transcription start site region 19890
Tssr19891 2 125229441 to 125229453 12 + TSS region transcription start site region 19891
Tssr19892 2 125229552 to 125229561 9 + TSS region transcription start site region 19892
Tssr19893 2 125235852 to 125235854 2 + TSS region transcription start site region 19893
Cpgi12195 2 125247102 to 125248138 1036 CpG island CpG island 12195
Dut 2 125247190 to 125258608 11418 + protein coding gene deoxyuridine triphosphatase
Tssr19894 2 125247226 to 125247287 61 + TSS region transcription start site region 19894
Tssr19895 2 125247709 to 125247743 34 + TSS region transcription start site region 19895
Tssr19896 2 125256434 to 125256445 11 + TSS region transcription start site region 19896
Tssr19897 2 125256470 to 125256476 6 + TSS region transcription start site region 19897
A530010F05Rik 2 125274564 to 125277172 2608 + antisense lncRNA gene RIKEN cDNA A530010F05 gene
Gm14003 2 125282688 to 125283978 1290 - lincRNA gene predicted gene 14003
Fbn1 2 125300594 to 125506485 205891 - protein coding gene fibrillin 1
Tssr25999 2 125301723 to 125301736 13 - TSS region transcription start site region 25999
D2Mit459 2 125365310 to 125365429 119 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 459