Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Tbvq2 | 2 | 9300000 | QTL | trabecular bone volume QTL 2 | ||
Cfq7 | 2 | 6680661 | QTL | conditioned fear QTL 7 | ||
pta | 2 | 6200825 | heritable phenotypic marker | persistent truncus arteriosus | ||
Tssr25970 | 2 | 7 | - | TSS region | transcription start site region 25970 | |
Gm14085 | 2 | 43099 | + | protein coding gene | predicted gene 14085 | |
Tssr19848 | 2 | 19 | + | TSS region | transcription start site region 19848 | |
Tssr25971 | 2 | 9 | - | TSS region | transcription start site region 25971 | |
Gm34325 | 2 | 15327 | + | lncRNA gene | predicted gene, 34325 | |
Gm17958 | 2 | 829 | - | pseudogene | predicted gene, 17958 | |
Tssr19849 | 2 | 8 | + | TSS region | transcription start site region 19849 | |
Gatm | 2 | 16804 | - | protein coding gene | glycine amidinotransferase (L-arginine:glycine amidinotransferase) | |
Tssr25972 | 2 | 8 | - | TSS region | transcription start site region 25972 | |
Tssr25973 | 2 | 8 | - | TSS region | transcription start site region 25973 | |
Tssr25974 | 2 | 18 | - | TSS region | transcription start site region 25974 | |
Tssr25975 | 2 | 22 | - | TSS region | transcription start site region 25975 | |
Tssr25976 | 2 | 40 | - | TSS region | transcription start site region 25976 | |
Tssr25977 | 2 | 27 | - | TSS region | transcription start site region 25977 | |
Tssr25978 | 2 | 10 | - | TSS region | transcription start site region 25978 | |
Tssr25979 | 2 | 32 | - | TSS region | transcription start site region 25979 | |
Tssr25980 | 2 | 20 | - | TSS region | transcription start site region 25980 | |
Tssr25981 | 2 | 12 | - | TSS region | transcription start site region 25981 | |
Tssr19850 | 2 | 19 | + | TSS region | transcription start site region 19850 | |
Tssr25982 | 2 | 11 | - | TSS region | transcription start site region 25982 | |
Tssr25983 | 2 | 7 | - | TSS region | transcription start site region 25983 | |
Cpgi12183 | 2 | 658 | CpG island | CpG island 12183 | ||
Tssr25984 | 2 | 11 | - | TSS region | transcription start site region 25984 | |
Tssr25985 | 2 | 45 | - | TSS region | transcription start site region 25985 | |
Cpgi12184 | 2 | 1314 | CpG island | CpG island 12184 | ||
Tssr19851 | 2 | 77 | + | TSS region | transcription start site region 19851 | |
Spata5l1 | 2 | 2305 | + | protein coding gene | spermatogenesis associated 5-like 1 | |
Tssr19852 | 2 | 31 | + | TSS region | transcription start site region 19852 | |
Tssr19853 | 2 | 11 | + | TSS region | transcription start site region 19853 | |
AA467197 | 2 | 4117 | + | protein coding gene | expressed sequence AA467197 | |
Cpgi12185 | 2 | 455 | CpG island | CpG island 12185 | ||
Tssr19854 | 2 | 20 | + | TSS region | transcription start site region 19854 | |
Tssr19855 | 2 | 56 | + | TSS region | transcription start site region 19855 | |
Mir147 | 2 | 78 | + | miRNA gene | microRNA 147 | |
Tssr19856 | 2 | 23 | + | TSS region | transcription start site region 19856 | |
Slc30a4 | 2 | 21430 | - | protein coding gene | solute carrier family 30 (zinc transporter), member 4 | |
Cpgi12186 | 2 | 1159 | CpG island | CpG island 12186 | ||
Tssr25986 | 2 | 102 | - | TSS region | transcription start site region 25986 | |
Tssr25987 | 2 | 58 | - | TSS region | transcription start site region 25987 | |
4930417H01Rik | 2 | 18628 | + | lncRNA gene | RIKEN cDNA 4930417H01 gene | |
1700056I18Rik | 2 | 567 | unclassified gene | RIKEN cDNA 1700056I18 gene | ||
Tssr25988 | 2 | 37 | - | TSS region | transcription start site region 25988 | |
Tssr19857 | 2 | 7 | + | TSS region | transcription start site region 19857 | |
Tssr19858 | 2 | 16 | + | TSS region | transcription start site region 19858 | |
Tssr19859 | 2 | 10 | + | TSS region | transcription start site region 19859 | |
Bloc1s6os | 2 | 5072 | - | antisense lncRNA gene | biogenesis of lysosomal organelles complex-1, subunit 6, pallidin, opposite strand | |
Cpgi12187 | 2 | 731 | CpG island | CpG island 12187 | ||
Tssr25989 | 2 | 20 | - | TSS region | transcription start site region 25989 | |
Tssr19860 | 2 | 105 | + | TSS region | transcription start site region 19860 | |
Bloc1s6 | 2 | 10972 | + | protein coding gene | biogenesis of lysosomal organelles complex-1, subunit 6, pallidin | |
Tssr19861 | 2 | 9 | + | TSS region | transcription start site region 19861 | |
Tssr19862 | 2 | 5 | + | TSS region | transcription start site region 19862 | |
Tssr19863 | 2 | 9 | + | TSS region | transcription start site region 19863 | |
Tssr19864 | 2 | 4 | + | TSS region | transcription start site region 19864 | |
Cpgi12188 | 2 | 776 | CpG island | CpG island 12188 | ||
Sqor | 2 | 44332 | + | protein coding gene | sulfide quinone oxidoreductase | |
Tssr19865 | 2 | 18 | + | TSS region | transcription start site region 19865 | |
Tssr19866 | 2 | 27 | + | TSS region | transcription start site region 19866 | |
Tssr628 | 2 | 42 | + | TSS region | transcription start site region 628 | |
Tssr19867 | 2 | 13 | + | TSS region | transcription start site region 19867 | |
Tssr19868 | 2 | 9 | + | TSS region | transcription start site region 19868 | |
Tssr19869 | 2 | 20 | + | TSS region | transcription start site region 19869 | |
D2Dcr66 | 2 | 150 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 66 | ||
D2Mit397 | 2 | 146 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 397 | ||
D2Dcr67 | 2 | 119 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 67 | ||
D2Mit396 | 2 | 118 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 396 | ||
Tssr25990 | 2 | 8 | - | TSS region | transcription start site region 25990 | |
Gm34430 | 2 | 969 | + | lncRNA gene | predicted gene, 34430 | |
Gm13988 | 2 | 287 | + | pseudogene | predicted gene 13988 | |
Otx2m2 | 2 | 25468404 | QTL | orthodenticle homolog 2 modifier 2 | ||
D2Mit164 | 2 | 142 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 164 | ||
D2Dcr68 | 2 | 119 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 68 | ||
Pbrgcsf1 | 2 | 149 | QTL | peripheral blood stem cell response to granulocyte colony stimulating factor 1 | ||
D2Mit255 | 2 | 149 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 255 | ||
D2Mit277 | 2 | 276 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 277 | ||
Tssr629 | 2 | 7 | - | TSS region | transcription start site region 629 | |
Gm39919 | 2 | 23924 | - | lncRNA gene | predicted gene, 39919 | |
D2Mit446 | 2 | 121 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 446 | ||
D2Mit485 | 2 | 123 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 485 | ||
Cpgi12189 | 2 | 1277 | CpG island | CpG island 12189 | ||
Tssr19870 | 2 | 57 | + | TSS region | transcription start site region 19870 | |
Sema6d | 2 | 577801 | + | protein coding gene | sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D | |
4930517E11Rik | 2 | 6320 | - | lincRNA gene | RIKEN cDNA 4930517E11 gene | |
Tssr630 | 2 | 2 | + | TSS region | transcription start site region 630 | |
4930583P06Rik | 2 | 4652 | - | lincRNA gene | RIKEN cDNA 4930583P06 gene | |
Tssr25991 | 2 | 20 | - | TSS region | transcription start site region 25991 | |
Bw25 | 2 | 0 | QTL | body weight QTL 25 | ||
Tssr25992 | 2 | 2 | - | TSS region | transcription start site region 25992 | |
Cpgi12190 | 2 | 1376 | CpG island | CpG island 12190 | ||
Tssr19871 | 2 | 23 | + | TSS region | transcription start site region 19871 | |
Tssr631 | 2 | 63 | + | TSS region | transcription start site region 631 | |
Tssr19872 | 2 | 7 | + | TSS region | transcription start site region 19872 | |
Tssr19873 | 2 | 14 | + | TSS region | transcription start site region 19873 | |
Tssr19874 | 2 | 21 | + | TSS region | transcription start site region 19874 | |
Tssr19875 | 2 | 6 | + | TSS region | transcription start site region 19875 | |
Gm34484 | 2 | 15112 | - | lncRNA gene | predicted gene, 34484 | |
Gm13994 | 2 | 2428 | + | lincRNA gene | predicted gene 13994 | |
Tssr25993 | 2 | 11 | - | TSS region | transcription start site region 25993 | |
Tssr25994 | 2 | 5 | - | TSS region | transcription start site region 25994 | |
D2Mit16a | 2 | 226 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 16a | ||
D2Mit16b | 2 | 165 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 16b | ||
D2Mit16.1 | 2 | 127 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 16.1 | ||
Gm39920 | 2 | 58539 | - | lncRNA gene | predicted gene, 39920 | |
D2Mit337 | 2 | 123 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 337 | ||
D2Dcr69 | 2 | 98 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 69 | ||
Tssr19876 | 2 | 2 | + | TSS region | transcription start site region 19876 | |
Tssr19877 | 2 | 15 | + | TSS region | transcription start site region 19877 | |
Slc24a5 | 2 | 20550 | + | protein coding gene | solute carrier family 24, member 5 | |
Tssr19878 | 2 | 15 | + | TSS region | transcription start site region 19878 | |
Myef2 | 2 | 39033 | - | protein coding gene | myelin basic protein expression factor 2, repressor | |
Tssr25995 | 2 | 7 | - | TSS region | transcription start site region 25995 | |
Tssr25996 | 2 | 4 | - | TSS region | transcription start site region 25996 | |
Gm22352 | 2 | 106 | + | snRNA gene | predicted gene, 22352 | |
Cpgi12191 | 2 | 1243 | CpG island | CpG island 12191 | ||
Tssr25997 | 2 | 36 | - | TSS region | transcription start site region 25997 | |
Tssr25998 | 2 | 30 | - | TSS region | transcription start site region 25998 | |
Gm46759 | 2 | 2493 | + | lncRNA gene | predicted gene, 46759 | |
Gm14004 | 2 | 9971 | - | unclassified non-coding RNA gene | predicted gene 14004 | |
Cpgi12192 | 2 | 509 | CpG island | CpG island 12192 | ||
Tssr19879 | 2 | 25 | + | TSS region | transcription start site region 19879 | |
Ctxn2 | 2 | 11147 | + | protein coding gene | cortexin 2 | |
Tssr19880 | 2 | 21 | + | TSS region | transcription start site region 19880 | |
Tssr19881 | 2 | 12 | + | TSS region | transcription start site region 19881 | |
Tssr19882 | 2 | 14 | + | TSS region | transcription start site region 19882 | |
Slc12a1 | 2 | 77402 | + | protein coding gene | solute carrier family 12, member 1 | |
Tssr19883 | 2 | 11 | + | TSS region | transcription start site region 19883 | |
Cpgi12193 | 2 | 247 | CpG island | CpG island 12193 | ||
Tssr19884 | 2 | 1 | + | TSS region | transcription start site region 19884 | |
Tssr19885 | 2 | 17 | + | TSS region | transcription start site region 19885 | |
Tssr19886 | 2 | 3 | + | TSS region | transcription start site region 19886 | |
Tssr19887 | 2 | 9 | + | TSS region | transcription start site region 19887 | |
Tssr19888 | 2 | 2 | + | TSS region | transcription start site region 19888 | |
Cpgi12194 | 2 | 215 | CpG island | CpG island 12194 | ||
Tssr19889 | 2 | 7 | + | TSS region | transcription start site region 19889 | |
Gm46760 | 2 | 8259 | - | lncRNA gene | predicted gene, 46760 | |
Gm14002 | 2 | 9983 | - | antisense lncRNA gene | predicted gene 14002 | |
Tssr19890 | 2 | 7 | + | TSS region | transcription start site region 19890 | |
Tssr19891 | 2 | 12 | + | TSS region | transcription start site region 19891 | |
Tssr19892 | 2 | 9 | + | TSS region | transcription start site region 19892 | |
Tssr19893 | 2 | 2 | + | TSS region | transcription start site region 19893 | |
Cpgi12195 | 2 | 1036 | CpG island | CpG island 12195 | ||
Dut | 2 | 11418 | + | protein coding gene | deoxyuridine triphosphatase | |
Tssr19894 | 2 | 61 | + | TSS region | transcription start site region 19894 | |
Tssr19895 | 2 | 34 | + | TSS region | transcription start site region 19895 | |
Tssr19896 | 2 | 11 | + | TSS region | transcription start site region 19896 | |
Tssr19897 | 2 | 6 | + | TSS region | transcription start site region 19897 | |
A530010F05Rik | 2 | 2608 | + | antisense lncRNA gene | RIKEN cDNA A530010F05 gene | |
Gm14003 | 2 | 1290 | - | lincRNA gene | predicted gene 14003 | |
Fbn1 | 2 | 205891 | - | protein coding gene | fibrillin 1 | |
Tssr25999 | 2 | 13 | - | TSS region | transcription start site region 25999 | |
D2Mit459 | 2 | 119 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 459 | ||
Tssr26000 | 2 | 31 | - | TSS region | transcription start site region 26000 | |
Gm9913 | 2 | 2792 | + | protein coding gene | predicted gene 9913 | |
Cpgi12196 | 2 | 1810 | CpG island | CpG island 12196 | ||
Tssr26001 | 2 | 7 | - | TSS region | transcription start site region 26001 | |
Tssr26002 | 2 | 20 | - | TSS region | transcription start site region 26002 | |
Tssr26003 | 2 | 24 | - | TSS region | transcription start site region 26003 | |
Tssr26004 | 2 | 32 | - | TSS region | transcription start site region 26004 | |
Tssr26005 | 2 | 13 | - | TSS region | transcription start site region 26005 | |
Tssr26006 | 2 | 26 | - | TSS region | transcription start site region 26006 | |
Cep152 | 2 | 62025 | - | protein coding gene | centrosomal protein 152 | |
Gm35029 | 2 | 4694 | + | lncRNA gene | predicted gene, 35029 | |
Tssr19898 | 2 | 15 | + | TSS region | transcription start site region 19898 | |
Gm34949 | 2 | 1417 | + | pseudogene | predicted gene, 34949 | |
Cpgi12197 | 2 | 619 | CpG island | CpG island 12197 | ||
Tssr26007 | 2 | 58 | - | TSS region | transcription start site region 26007 | |
Shc4 | 2 | 96701 | - | protein coding gene | SHC (Src homology 2 domain containing) family, member 4 | |
Cpgi12198 | 2 | 234 | CpG island | CpG island 12198 | ||
D2Mit105 | 2 | 107 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 105 | ||
Cpgi12199 | 2 | 1055 | CpG island | CpG island 12199 | ||
Tssr19899 | 2 | 56 | + | TSS region | transcription start site region 19899 | |
Eid1 | 2 | 1690 | + | protein coding gene | EP300 interacting inhibitor of differentiation 1 | |
Tssr19900 | 2 | 35 | + | TSS region | transcription start site region 19900 | |
Tssr19901 | 2 | 11 | + | TSS region | transcription start site region 19901 | |
Tssr19902 | 2 | 20 | + | TSS region | transcription start site region 19902 | |
Gm35231 | 2 | 1880 | + | lncRNA gene | predicted gene, 35231 | |
Cpgi12200 | 2 | 565 | CpG island | CpG island 12200 | ||
Tssr26008 | 2 | 13 | - | TSS region | transcription start site region 26008 | |
Tssr26009 | 2 | 34 | - | TSS region | transcription start site region 26009 | |
Tssr26010 | 2 | 16 | - | TSS region | transcription start site region 26010 | |
D2Mit398 | 2 | 144 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 398 | ||
D2Dcr70 | 2 | 99 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 70 | ||
Cpgi12201 | 2 | 337 | CpG island | CpG island 12201 | ||
BC026863 | 2 | 1330 | unclassified gene | cDNA sequence BC026863 | ||
Secisbp2l | 2 | 45884 | - | protein coding gene | SECIS binding protein 2-like | |
Tssr26011 | 2 | 5 | - | TSS region | transcription start site region 26011 | |
Tssr26012 | 2 | 21 | - | TSS region | transcription start site region 26012 | |
Tssr26013 | 2 | 4 | - | TSS region | transcription start site region 26013 | |
D2Dcr71 | 2 | 98 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 71 | ||
Tssr26014 | 2 | 58 | - | TSS region | transcription start site region 26014 | |
Tssr26015 | 2 | 22 | - | TSS region | transcription start site region 26015 | |
Tssr26016 | 2 | 23 | - | TSS region | transcription start site region 26016 | |
Cpgi12202 | 2 | 708 | CpG island | CpG island 12202 | ||
Tssr26017 | 2 | 18 | - | TSS region | transcription start site region 26017 | |
Tssr26018 | 2 | 38 | - | TSS region | transcription start site region 26018 | |
Tssr26019 | 2 | 28 | - | TSS region | transcription start site region 26019 | |
Tssr26020 | 2 | 11 | - | TSS region | transcription start site region 26020 |