Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:121958580-122123632

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ctdspl2 2 121956001 to 122013642 57641 + protein coding gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
Tssr625 2 121985677 to 121985682 5 + TSS region transcription start site region 625
Tssr19795 2 121987978 to 121987982 4 + TSS region transcription start site region 19795
Tssr19796 2 122000658 to 122000663 5 + TSS region transcription start site region 19796
Tssr19797 2 122014805 to 122014809 4 + TSS region transcription start site region 19797
Cpgi12167 2 122028007 to 122029375 1368 CpG island CpG island 12167
Tssr19798 2 122028121 to 122028147 26 + TSS region transcription start site region 19798
Tssr19799 2 122028544 to 122028563 19 + TSS region transcription start site region 19799
Eif3j1 2 122028580 to 122053632 25052 + protein coding gene eukaryotic translation initiation factor 3, subunit J1
Tssr19800 2 122028586 to 122028598 12 + TSS region transcription start site region 19800
Tssr19801 2 122028601 to 122028664 63 + TSS region transcription start site region 19801
Gm47314 2 122028642 to 122028709 67 + miRNA gene predicted gene, 47314
Spg11 2 122053520 to 122118386 64866 - protein coding gene SPG11, spatacsin vesicle trafficking associated
5830407F19Rik 2 122098497 to 122100333 1836 unclassified gene RIKEN cDNA 5830407F19 gene
Tssr19802 2 122116924 to 122116935 11 + TSS region transcription start site region 19802
Cpgi12168 2 122117957 to 122118596 639 CpG island CpG island 12168
Tssr25950 2 122118317 to 122118349 32 - TSS region transcription start site region 25950
Tssr25951 2 122118364 to 122118397 33 - TSS region transcription start site region 25951
Tssr19803 2 122118539 to 122118554 15 + TSS region transcription start site region 19803
Patl2 2 122120108 to 122186189 66081 - protein coding gene protein associated with topoisomerase II homolog 2 (yeast)