Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:121309698-121400549

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map1a 2 121289601 to 121310832 21231 + protein coding gene microtubule-associated protein 1 A
Ppip5k1 2 121310561 to 121355396 44835 - protein coding gene diphosphoinositol pentakisphosphate kinase 1
Tssr25923 2 121313741 to 121313745 4 - TSS region transcription start site region 25923
Tssr25924 2 121314731 to 121314734 3 - TSS region transcription start site region 25924
Cpgi12155 2 121354698 to 121355549 851 CpG island CpG island 12155
Tssr25925 2 121355066 to 121355084 18 - TSS region transcription start site region 25925
Tssr25926 2 121355320 to 121355367 47 - TSS region transcription start site region 25926
Ckmt1 2 121357751 to 121363737 5986 + protein coding gene creatine kinase, mitochondrial 1, ubiquitous
Tssr19750 2 121357768 to 121357782 14 + TSS region transcription start site region 19750
Gm33947 2 121357815 to 121358271 456 - lncRNA gene predicted gene, 33947
Cpgi12156 2 121358541 to 121359003 462 CpG island CpG island 12156
Tssr19751 2 121358591 to 121358713 122 + TSS region transcription start site region 19751
Tssr622 2 121358881 to 121358884 3 + TSS region transcription start site region 622
Tssr19752 2 121359273 to 121359278 5 + TSS region transcription start site region 19752
Tssr19753 2 121359558 to 121359569 11 + TSS region transcription start site region 19753
Strc 2 121363248 to 121381370 18122 - protein coding gene stereocilin
D2Mit134 2 121363292 to 121363495 203 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 134
Tssr19754 2 121363661 to 121363670 9 + TSS region transcription start site region 19754
Tssr25927 2 121380931 to 121380938 7 - TSS region transcription start site region 25927
Tssr25928 2 121380941 to 121380947 6 - TSS region transcription start site region 25928
Tssr25929 2 121380959 to 121380975 16 - TSS region transcription start site region 25929
Catsper2 2 121392631 to 121413792 21161 - protein coding gene cation channel, sperm associated 2