Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Bahd1 | 2 | 24151 | + | protein coding gene | bromo adjacent homology domain containing 1 | |
Cpgi12099 | 2 | 1068 | CpG island | CpG island 12099 | ||
Tssr19592 | 2 | 58 | + | TSS region | transcription start site region 19592 | |
Chst14 | 2 | 2088 | + | protein coding gene | carbohydrate sulfotransferase 14 | |
Tssr19593 | 2 | 20 | + | TSS region | transcription start site region 19593 | |
Tssr19594 | 2 | 32 | + | TSS region | transcription start site region 19594 | |
Cpgi12100 | 2 | 369 | CpG island | CpG island 12100 | ||
Cpgi12101 | 2 | 926 | CpG island | CpG island 12101 | ||
Gm39914 | 2 | 8736 | - | lncRNA gene | predicted gene, 39914 | |
Tssr19595 | 2 | 3 | + | TSS region | transcription start site region 19595 | |
Gm14089 | 2 | 3616 | + | antisense lncRNA gene | predicted gene 14089 | |
Tssr19596 | 2 | 17 | + | TSS region | transcription start site region 19596 | |
Uqcrh-ps2 | 2 | 268 | + | pseudogene | ubiquinol-cytochrome c reductase hinge protein, pseudogene 2 | |
Ccdc32 | 2 | 11614 | - | protein coding gene | coiled-coil domain containing 32 | |
Cpgi12102 | 2 | 286 | CpG island | CpG island 12102 | ||
Tssr25795 | 2 | 8 | - | TSS region | transcription start site region 25795 | |
Tssr25796 | 2 | 3 | - | TSS region | transcription start site region 25796 | |
Tssr25797 | 2 | 30 | - | TSS region | transcription start site region 25797 | |
Tssr25798 | 2 | 3 | - | TSS region | transcription start site region 25798 | |
Cpgi12103 | 2 | 808 | CpG island | CpG island 12103 | ||
Tssr19597 | 2 | 86 | + | TSS region | transcription start site region 19597 | |
Rpusd2 | 2 | 4979 | + | protein coding gene | RNA pseudouridylate synthase domain containing 2 | |
Tssr19598 | 2 | 7 | + | TSS region | transcription start site region 19598 | |
n-TSgct7 | 2 | 81 | - | tRNA gene | nuclear encoded tRNA serine 7 (anticodon GCT) | |
Cpgi12104 | 2 | 827 | CpG island | CpG island 12104 | ||
Knl1 | 2 | 57791 | + | protein coding gene | kinetochore scaffold 1 | |
Tssr19599 | 2 | 5 | + | TSS region | transcription start site region 19599 | |
Tssr19600 | 2 | 30 | + | TSS region | transcription start site region 19600 | |
Tssr19601 | 2 | 52 | + | TSS region | transcription start site region 19601 | |
Tssr19602 | 2 | 12 | + | TSS region | transcription start site region 19602 | |
n-TIaat12 | 2 | 73 | - | tRNA gene | nuclear encoded tRNA isoleucine 12 (anticodon GAT) | |
D2Mit133 | 2 | 199 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 133 | ||
W6q1 | 2 | -98171392 | QTL | weight 6 weeks QTL 1 | ||
Hrtq1 | 2 | -98171392 | QTL | heart weight QTL 1 | ||
Egq1 | 2 | -98171392 | QTL | early growth QTL 1 | ||
W10q9 | 2 | -98171392 | QTL | weight 10 weeks QTL 9 | ||
Kidq1 | 2 | -98171392 | QTL | kidney weight QTL 1 | ||
W3q1 | 2 | -98171392 | QTL | weight 3 weeks QTL 1 | ||
Splq1 | 2 | -98171392 | QTL | spleen weight QTL 1 | ||
Estoq1 | 2 | -98171392 | QTL | embryo survival total QTL 1 | ||
Lvrq1 | 2 | -98171392 | QTL | liver weight QTL 1 | ||
Cpgi12105 | 2 | 918 | CpG island | CpG island 12105 | ||
Tssr25799 | 2 | 21 | - | TSS region | transcription start site region 25799 | |
Tssr19603 | 2 | 73 | + | TSS region | transcription start site region 19603 | |
Rad51 | 2 | 23253 | + | protein coding gene | RAD51 recombinase | |
Rmdn3 | 2 | 20033 | - | protein coding gene | regulator of microtubule dynamics 3 | |
Cpgi12106 | 2 | 1130 | CpG island | CpG island 12106 | ||
Tssr25800 | 2 | 50 | - | TSS region | transcription start site region 25800 | |
Cpgi12107 | 2 | 931 | CpG island | CpG island 12107 | ||
Tssr19604 | 2 | 21 | + | TSS region | transcription start site region 19604 | |
Tssr19605 | 2 | 53 | + | TSS region | transcription start site region 19605 | |
Gchfr | 2 | 4601 | + | protein coding gene | GTP cyclohydrolase I feedback regulator | |
Dnajc17 | 2 | 36295 | - | protein coding gene | DnaJ heat shock protein family (Hsp40) member C17 | |
Tssr25801 | 2 | 7 | - | TSS region | transcription start site region 25801 | |
Tssr615 | 2 | 17 | + | TSS region | transcription start site region 615 | |
Tssr19606 | 2 | 44 | + | TSS region | transcription start site region 19606 | |
Gm14137 | 2 | 3066 | + | protein coding gene | predicted gene 14137 | |
Tssr19607 | 2 | 11 | + | TSS region | transcription start site region 19607 | |
Tssr25802 | 2 | 30 | - | TSS region | transcription start site region 25802 | |
Tssr616 | 2 | 5 | + | TSS region | transcription start site region 616 | |
Gm14138 | 2 | 741 | + | pseudogene | predicted gene 14138 | |
Cpgi12108 | 2 | 956 | CpG island | CpG island 12108 | ||
Zfyve19 | 2 | 8330 | + | protein coding gene | zinc finger, FYVE domain containing 19 | |
Tssr25803 | 2 | 35 | - | TSS region | transcription start site region 25803 | |
Tssr19608 | 2 | 54 | + | TSS region | transcription start site region 19608 | |
Ppp1r14d | 2 | 11787 | - | protein coding gene | protein phosphatase 1, regulatory inhibitor subunit 14D | |
Tssr25804 | 2 | 16 | - | TSS region | transcription start site region 25804 | |
Tssr25805 | 2 | 28 | - | TSS region | transcription start site region 25805 | |
Tssr25806 | 2 | 28 | - | TSS region | transcription start site region 25806 | |
Tssr25807 | 2 | 12 | - | TSS region | transcription start site region 25807 | |
Tssr25808 | 2 | 11 | - | TSS region | transcription start site region 25808 | |
9130007G19Rik | 2 | 2264 | unclassified gene | RIKEN cDNA 9130007G19 gene | ||
Cpgi12109 | 2 | 1565 | CpG island | CpG island 12109 | ||
Tssr19609 | 2 | 12 | + | TSS region | transcription start site region 19609 | |
Tssr19610 | 2 | 23 | + | TSS region | transcription start site region 19610 | |
Spint1 | 2 | 12165 | + | protein coding gene | serine protease inhibitor, Kunitz type 1 | |
Tssr19611 | 2 | 30 | + | TSS region | transcription start site region 19611 | |
Tssr19612 | 2 | 21 | + | TSS region | transcription start site region 19612 | |
Tssr19613 | 2 | 26 | + | TSS region | transcription start site region 19613 | |
Tssr19614 | 2 | 13 | + | TSS region | transcription start site region 19614 | |
Tssr19615 | 2 | 21 | + | TSS region | transcription start site region 19615 | |
Tssr19616 | 2 | 11 | + | TSS region | transcription start site region 19616 | |
Tssr19617 | 2 | 3 | + | TSS region | transcription start site region 19617 | |
Tssr19618 | 2 | 32 | + | TSS region | transcription start site region 19618 | |
Tssr19619 | 2 | 15 | + | TSS region | transcription start site region 19619 | |
Tssr19620 | 2 | 16 | + | TSS region | transcription start site region 19620 | |
Tssr19621 | 2 | 39 | + | TSS region | transcription start site region 19621 | |
Rhov | 2 | 2071 | - | protein coding gene | ras homolog family member V | |
Cpgi12110 | 2 | 743 | CpG island | CpG island 12110 | ||
Tssr25809 | 2 | 33 | - | TSS region | transcription start site region 25809 | |
Cpgi12111 | 2 | 222 | CpG island | CpG island 12111 | ||
Tssr25810 | 2 | 9 | - | TSS region | transcription start site region 25810 | |
Tssr25811 | 2 | 11 | - | TSS region | transcription start site region 25811 | |
Gm14175 | 2 | 240 | + | pseudogene | predicted gene 14175 | |
Cpgi12112 | 2 | 709 | CpG island | CpG island 12112 | ||
Tssr19622 | 2 | 46 | + | TSS region | transcription start site region 19622 | |
Vps18 | 2 | 9711 | + | protein coding gene | VPS18 CORVET/HOPS core subunit | |
Tssr19623 | 2 | 23 | + | TSS region | transcription start site region 19623 | |
Tssr19624 | 2 | 25 | + | TSS region | transcription start site region 19624 | |
Cpgi12113 | 2 | 1113 | CpG island | CpG island 12113 | ||
Gm14207 | 2 | 4998 | - | lncRNA gene | predicted gene 14207 | |
Cpgi12114 | 2 | 1317 | CpG island | CpG island 12114 | ||
Cpgi12115 | 2 | 807 | CpG island | CpG island 12115 | ||
Tssr25812 | 2 | 24 | - | TSS region | transcription start site region 25812 | |
Cpgi12116 | 2 | 2377 | CpG island | CpG island 12116 | ||
Tssr25813 | 2 | 23 | - | TSS region | transcription start site region 25813 | |
Tssr25814 | 2 | 37 | - | TSS region | transcription start site region 25814 | |
Dll4 | 2 | 9882 | + | protein coding gene | delta like canonical Notch ligand 4 | |
Tssr19625 | 2 | 4 | + | TSS region | transcription start site region 19625 | |
D2Mit104 | 2 | 147 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 104 | ||
D2Dcr63 | 2 | 119 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 63 | ||
Tssr19626 | 2 | 17 | + | TSS region | transcription start site region 19626 | |
Cpgi12117 | 2 | 253 | CpG island | CpG island 12117 | ||
Cpgi12118 | 2 | 1019 | CpG island | CpG island 12118 | ||
Tssr25815 | 2 | 5 | - | TSS region | transcription start site region 25815 | |
Cpgi12119 | 2 | 957 | CpG island | CpG island 12119 | ||
Tssr19627 | 2 | 9 | + | TSS region | transcription start site region 19627 | |
Tssr19628 | 2 | 11 | + | TSS region | transcription start site region 19628 | |
Chac1 | 2 | 3084 | + | protein coding gene | ChaC, cation transport regulator 1 | |
Tssr19629 | 2 | 12 | + | TSS region | transcription start site region 19629 | |
Tssr19630 | 2 | 17 | + | TSS region | transcription start site region 19630 | |
Tssr19631 | 2 | 14 | + | TSS region | transcription start site region 19631 | |
Tssr19632 | 2 | 3 | + | TSS region | transcription start site region 19632 | |
Tssr19633 | 2 | 6 | + | TSS region | transcription start site region 19633 | |
Tssr19634 | 2 | 9 | + | TSS region | transcription start site region 19634 | |
Ino80 | 2 | 104587 | - | protein coding gene | INO80 complex subunit | |
Tssr25816 | 2 | 5 | - | TSS region | transcription start site region 25816 | |
Tssr25817 | 2 | 6 | - | TSS region | transcription start site region 25817 | |
Tssr25818 | 2 | 4 | - | TSS region | transcription start site region 25818 | |
Tssr25819 | 2 | 13 | - | TSS region | transcription start site region 25819 | |
Tssr25820 | 2 | 21 | - | TSS region | transcription start site region 25820 | |
Tssr25821 | 2 | 5 | - | TSS region | transcription start site region 25821 | |
Cpgi12120 | 2 | 1795 | CpG island | CpG island 12120 | ||
Tssr19635 | 2 | 36 | + | TSS region | transcription start site region 19635 | |
Tssr25822 | 2 | 88 | - | TSS region | transcription start site region 25822 | |
1700100M05Rik | 2 | 745 | unclassified gene | RIKEN cDNA 1700100M05 gene | ||
Tssr19636 | 2 | 9 | + | TSS region | transcription start site region 19636 | |
Gm33412 | 2 | 8693 | + | lncRNA gene | predicted gene, 33412 | |
Gm14208 | 2 | 677 | - | pseudogene | predicted gene 14208 | |
Exd1 | 2 | 31122 | - | protein coding gene | exonuclease 3'-5' domain containing 1 | |
D2Dcr64 | 2 | 121 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 64 | ||
D2Mit395 | 2 | 124 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 395 | ||
pta | 2 | 6200825 | heritable phenotypic marker | persistent truncus arteriosus | ||
Trmq3 | 2 | -58834769 | QTL | T cell ratio modifier QTL 3 | ||
Tssr25823 | 2 | 5 | - | TSS region | transcription start site region 25823 | |
Cpgi12121 | 2 | 1284 | CpG island | CpG island 12121 | ||
Tssr19637 | 2 | 14 | + | TSS region | transcription start site region 19637 | |
Tssr19638 | 2 | 61 | + | TSS region | transcription start site region 19638 | |
Chp1 | 2 | 39317 | + | protein coding gene | calcineurin-like EF hand protein 1 | |
Tssr19639 | 2 | 37 | + | TSS region | transcription start site region 19639 | |
Tssr19640 | 2 | 13 | + | TSS region | transcription start site region 19640 | |
Tssr19641 | 2 | 19 | + | TSS region | transcription start site region 19641 | |
Cpgi12122 | 2 | 684 | CpG island | CpG island 12122 | ||
Tssr19642 | 2 | 44 | + | TSS region | transcription start site region 19642 | |
1700020I14Rik | 2 | 6450 | + | lincRNA gene | RIKEN cDNA 1700020I14 gene | |
Tssr19643 | 2 | 5 | + | TSS region | transcription start site region 19643 | |
Tssr19644 | 2 | 22 | + | TSS region | transcription start site region 19644 | |
Oip5 | 2 | 8957 | - | protein coding gene | Opa interacting protein 5 | |
Cpgi12123 | 2 | 957 | CpG island | CpG island 12123 | ||
Nusap1 | 2 | 31867 | + | protein coding gene | nucleolar and spindle associated protein 1 | |
Tssr25824 | 2 | 55 | - | TSS region | transcription start site region 25824 | |
Tssr19645 | 2 | 16 | + | TSS region | transcription start site region 19645 | |
n-R5s204 | 2 | 118 | + | rRNA gene | nuclear encoded rRNA 5S 204 | |
Tssr19646 | 2 | 4 | + | TSS region | transcription start site region 19646 | |
Ndufaf1 | 2 | 7381 | - | protein coding gene | NADH:ubiquinone oxidoreductase complex assembly factor 1 | |
Cpgi12124 | 2 | 381 | CpG island | CpG island 12124 | ||
Tssr25825 | 2 | 79 | - | TSS region | transcription start site region 25825 | |
H3f3c | 2 | 410 | - | pseudogene | H3 histone, family 3C | |
Tssr25826 | 2 | 3 | - | TSS region | transcription start site region 25826 | |
Gm14383 | 2 | 385 | + | pseudogene | predicted gene 14383 | |
Cpgi12125 | 2 | 1111 | CpG island | CpG island 12125 | ||
Tssr19647 | 2 | 33 | + | TSS region | transcription start site region 19647 | |
Rtf1 | 2 | 60339 | + | protein coding gene | RTF1, Paf1/RNA polymerase II complex component | |
Tssr19648 | 2 | 33 | + | TSS region | transcription start site region 19648 | |
Tssr19649 | 2 | 14 | + | TSS region | transcription start site region 19649 | |
Tssr19650 | 2 | 12 | + | TSS region | transcription start site region 19650 | |
Tssr19651 | 2 | 16 | + | TSS region | transcription start site region 19651 | |
Tssr19652 | 2 | 10 | + | TSS region | transcription start site region 19652 | |
Tssr19653 | 2 | 10 | + | TSS region | transcription start site region 19653 | |
Tssr19654 | 2 | 37 | + | TSS region | transcription start site region 19654 | |
Tssr19655 | 2 | 2 | + | TSS region | transcription start site region 19655 | |
Gm25857 | 2 | 128 | - | snoRNA gene | predicted gene, 25857 | |
Cpgi12126 | 2 | 3260 | CpG island | CpG island 12126 | ||
Tssr19656 | 2 | 16 | + | TSS region | transcription start site region 19656 | |
Tssr19657 | 2 | 25 | + | TSS region | transcription start site region 19657 | |
Itpka | 2 | 8916 | + | protein coding gene | inositol 1,4,5-trisphosphate 3-kinase A | |
Tssr19658 | 2 | 11 | + | TSS region | transcription start site region 19658 | |
Tssr25827 | 2 | 45 | - | TSS region | transcription start site region 25827 | |
Cpgi12127 | 2 | 616 | CpG island | CpG island 12127 | ||
Ltk | 2 | 9105 | - | protein coding gene | leukocyte tyrosine kinase | |
Cpgi12128 | 2 | 1891 | CpG island | CpG island 12128 | ||
Tssr25828 | 2 | 12 | - | TSS region | transcription start site region 25828 | |
Rpap1 | 2 | 23578 | - | protein coding gene | RNA polymerase II associated protein 1 | |
Cpgi12129 | 2 | 629 | CpG island | CpG island 12129 | ||
Tssr25829 | 2 | 29 | - | TSS region | transcription start site region 25829 | |
Gm23814 | 2 | 101 | - | snRNA gene | predicted gene, 23814 | |
Tyro3 | 2 | 20364 | + | protein coding gene | TYRO3 protein tyrosine kinase 3 | |
Tssr19659 | 2 | 11 | + | TSS region | transcription start site region 19659 | |
Cpgi12130 | 2 | 1369 | CpG island | CpG island 12130 | ||
Tssr19660 | 2 | 30 | + | TSS region | transcription start site region 19660 |