Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:118800377-119024528

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm38629 2 118799999 to 118811178 11179 + lncRNA gene predicted gene, 38629
Cpgi12094 2 118813930 to 118814712 782 CpG island CpG island 12094
Knstrn 2 118813988 to 118837210 23222 + protein coding gene kinetochore-localized astrin/SPAG5 binding
Tssr19579 2 118813995 to 118814027 32 + TSS region transcription start site region 19579
Tssr19580 2 118814029 to 118814040 11 + TSS region transcription start site region 19580
Tssr19581 2 118814195 to 118814235 40 + TSS region transcription start site region 19581
Tssr19582 2 118814237 to 118814261 24 + TSS region transcription start site region 19582
Gm14091 2 118829874 to 118834122 4248 - antisense lncRNA gene predicted gene 14091
Tssr19583 2 118830022 to 118830027 5 + TSS region transcription start site region 19583
Tssr25794 2 118834157 to 118834196 39 - TSS region transcription start site region 25794
Gm39913 2 118837390 to 118861882 24492 - lncRNA gene predicted gene, 39913
Cpgi12095 2 118861837 to 118862276 439 CpG island CpG island 12095
Ivd 2 118861959 to 118882907 20948 + protein coding gene isovaleryl coenzyme A dehydrogenase
Tssr19584 2 118861986 to 118862008 22 + TSS region transcription start site region 19584
Tssr19585 2 118862009 to 118862022 13 + TSS region transcription start site region 19585
Tssr19586 2 118870375 to 118870402 27 + TSS region transcription start site region 19586
Cpgi12096 2 118883274 to 118883794 520 CpG island CpG island 12096
Gm32798 2 118887481 to 118894929 7448 + lncRNA gene predicted gene, 32798
Gm32957 2 118895347 to 118900288 4941 - lncRNA gene predicted gene, 32957
Cpgi12097 2 118896220 to 118897157 937 CpG island CpG island 12097
Bahd1 2 118900377 to 118924528 24151 + protein coding gene bromo adjacent homology domain containing 1
Tssr19587 2 118900379 to 118900397 18 + TSS region transcription start site region 19587
Cpgi12098 2 118900746 to 118903143 2397 CpG island CpG island 12098
Tssr19588 2 118901381 to 118901403 22 + TSS region transcription start site region 19588
Tssr19589 2 118901428 to 118901488 60 + TSS region transcription start site region 19589
Tssr19590 2 118901589 to 118901617 28 + TSS region transcription start site region 19590
Tssr19591 2 118901621 to 118901663 42 + TSS region transcription start site region 19591
Cpgi12099 2 118926286 to 118927354 1068 CpG island CpG island 12099
Tssr19592 2 118926496 to 118926554 58 + TSS region transcription start site region 19592
Chst14 2 118926497 to 118928585 2088 + protein coding gene carbohydrate sulfotransferase 14
Tssr19593 2 118926555 to 118926575 20 + TSS region transcription start site region 19593
Tssr19594 2 118926576 to 118926608 32 + TSS region transcription start site region 19594
Cpgi12100 2 118972693 to 118973062 369 CpG island CpG island 12100
Cpgi12101 2 118976002 to 118976928 926 CpG island CpG island 12101
Gm39914 2 118979591 to 118988327 8736 - lncRNA gene predicted gene, 39914
Tssr19595 2 118997044 to 118997047 3 + TSS region transcription start site region 19595
Gm14089 2 118997068 to 119000684 3616 + antisense lncRNA gene predicted gene 14089
Tssr19596 2 119008132 to 119008149 17 + TSS region transcription start site region 19596
Uqcrh-ps2 2 119008209 to 119008477 268 + pseudogene ubiquinol-cytochrome c reductase hinge protein, pseudogene 2
Ccdc32 2 119017779 to 119029393 11614 - protein coding gene coiled-coil domain containing 32