Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cfq7 | 2 | 6680661 | QTL | conditioned fear QTL 7 | ||
Bmf | 2 | 20921 | - | protein coding gene | BCL2 modifying factor | |
Tssr25776 | 2 | 5 | - | TSS region | transcription start site region 25776 | |
Cpgi12082 | 2 | 301 | CpG island | CpG island 12082 | ||
Tssr25777 | 2 | 7 | - | TSS region | transcription start site region 25777 | |
Tssr25778 | 2 | 34 | - | TSS region | transcription start site region 25778 | |
Tssr19559 | 2 | 9 | + | TSS region | transcription start site region 19559 | |
Tssr25779 | 2 | 24 | - | TSS region | transcription start site region 25779 | |
Tssr25780 | 2 | 26 | - | TSS region | transcription start site region 25780 | |
Cpgi12083 | 2 | 1003 | CpG island | CpG island 12083 | ||
Tssr25781 | 2 | 30 | - | TSS region | transcription start site region 25781 | |
Tssr25782 | 2 | 15 | - | TSS region | transcription start site region 25782 | |
Tssr19560 | 2 | 5 | + | TSS region | transcription start site region 19560 | |
Tssr19561 | 2 | 3 | + | TSS region | transcription start site region 19561 | |
D2Dcr62 | 2 | 114 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 62 | ||
D2Mit484 | 2 | 111 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 484 | ||
Gm14016 | 2 | 485 | + | pseudogene | predicted gene 14016 | |
Cpgi12084 | 2 | 605 | CpG island | CpG island 12084 | ||
Tssr19562 | 2 | 17 | + | TSS region | transcription start site region 19562 | |
Bub1b | 2 | 43380 | + | protein coding gene | BUB1B, mitotic checkpoint serine/threonine kinase | |
Tssr19563 | 2 | 35 | + | TSS region | transcription start site region 19563 | |
Tssr19564 | 2 | 29 | + | TSS region | transcription start site region 19564 | |
Tssr25783 | 2 | 38 | - | TSS region | transcription start site region 25783 | |
1700008N17Rik | 2 | 1250 | unclassified gene | RIKEN cDNA 1700008N17 gene | ||
Cpgi12085 | 2 | 333 | CpG island | CpG island 12085 | ||
Tssr19565 | 2 | 74 | + | TSS region | transcription start site region 19565 | |
Pak6 | 2 | 34717 | + | protein coding gene | p21 (RAC1) activated kinase 6 | |
Tssr19566 | 2 | 17 | + | TSS region | transcription start site region 19566 | |
Tssr19567 | 2 | 40 | + | TSS region | transcription start site region 19567 | |
Cpgi12086 | 2 | 1392 | CpG island | CpG island 12086 | ||
Tssr613 | 2 | 55 | + | TSS region | transcription start site region 613 | |
Cpgi12087 | 2 | 287 | CpG island | CpG island 12087 | ||
Ankrd63 | 2 | 4860 | - | protein coding gene | ankyrin repeat domain 63 | |
Cpgi12088 | 2 | 331 | CpG island | CpG island 12088 | ||
Cpgi12089 | 2 | 2494 | CpG island | CpG island 12089 | ||
Plcb2 | 2 | 20921 | - | protein coding gene | phospholipase C, beta 2 | |
Tssr25784 | 2 | 11 | - | TSS region | transcription start site region 25784 | |
Tssr19568 | 2 | 17 | + | TSS region | transcription start site region 19568 | |
Cpgi12090 | 2 | 826 | CpG island | CpG island 12090 | ||
Tssr25785 | 2 | 8 | - | TSS region | transcription start site region 25785 | |
Tssr25786 | 2 | 11 | - | TSS region | transcription start site region 25786 | |
Tssr25787 | 2 | 18 | - | TSS region | transcription start site region 25787 | |
Tssr614 | 2 | 11 | - | TSS region | transcription start site region 614 | |
Tssr25788 | 2 | 22 | - | TSS region | transcription start site region 25788 | |
Tssr25789 | 2 | 56 | - | TSS region | transcription start site region 25789 | |
Tssr25790 | 2 | 16 | - | TSS region | transcription start site region 25790 | |
Tssr25791 | 2 | 18 | - | TSS region | transcription start site region 25791 | |
Tssr25792 | 2 | 52 | - | TSS region | transcription start site region 25792 | |
Cpgi12091 | 2 | 1872 | CpG island | CpG island 12091 | ||
Tssr19569 | 2 | 35 | + | TSS region | transcription start site region 19569 | |
Inafm2 | 2 | 3052 | + | protein coding gene | InaF motif containing 2 | |
Tssr19570 | 2 | 22 | + | TSS region | transcription start site region 19570 | |
Tssr19571 | 2 | 4 | + | TSS region | transcription start site region 19571 | |
Tssr19572 | 2 | 2 | + | TSS region | transcription start site region 19572 | |
Ccdc9b | 2 | 8503 | - | protein coding gene | coiled-coil domain containing 9B | |
Pwbwq5 | 2 | 42010473 | QTL | post-weaning body weight QTL 5 | ||
Pwgrq2 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 2 | ||
Pwgrq1 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 1 | ||
Pwbwq1 | 2 | 42010473 | QTL | pre-weaning body weight QTL 1 | ||
Tssr25793 | 2 | 59 | - | TSS region | transcription start site region 25793 | |
Tssr19573 | 2 | 14 | + | TSS region | transcription start site region 19573 | |
Phgr1 | 2 | 5395 | + | protein coding gene | proline/histidine/glycine-rich 1 | |
D2Mit444 | 2 | 174 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 444 | ||
Cpgi12092 | 2 | 651 | CpG island | CpG island 12092 | ||
Tssr19574 | 2 | 11 | + | TSS region | transcription start site region 19574 | |
Disp2 | 2 | 15473 | + | protein coding gene | dispatched RND tramsporter family member 2 | |
Tssr19575 | 2 | 74 | + | TSS region | transcription start site region 19575 | |
Tssr19576 | 2 | 5 | + | TSS region | transcription start site region 19576 | |
Tssr19577 | 2 | 3 | + | TSS region | transcription start site region 19577 | |
Tssr19578 | 2 | 7 | + | TSS region | transcription start site region 19578 | |
Cpgi12093 | 2 | 743 | CpG island | CpG island 12093 | ||
Gm38629 | 2 | 11179 | + | lncRNA gene | predicted gene, 38629 | |
Cpgi12094 | 2 | 782 | CpG island | CpG island 12094 | ||
Knstrn | 2 | 23222 | + | protein coding gene | kinetochore-localized astrin/SPAG5 binding | |
Tssr19579 | 2 | 32 | + | TSS region | transcription start site region 19579 | |
Tssr19580 | 2 | 11 | + | TSS region | transcription start site region 19580 | |
Tssr19581 | 2 | 40 | + | TSS region | transcription start site region 19581 | |
Tssr19582 | 2 | 24 | + | TSS region | transcription start site region 19582 | |
Gm14091 | 2 | 4248 | - | antisense lncRNA gene | predicted gene 14091 | |
Tssr19583 | 2 | 5 | + | TSS region | transcription start site region 19583 | |
Tssr25794 | 2 | 39 | - | TSS region | transcription start site region 25794 | |
Gm39913 | 2 | 24492 | - | lncRNA gene | predicted gene, 39913 | |
Cpgi12095 | 2 | 439 | CpG island | CpG island 12095 | ||
Ivd | 2 | 20948 | + | protein coding gene | isovaleryl coenzyme A dehydrogenase | |
Tssr19584 | 2 | 22 | + | TSS region | transcription start site region 19584 | |
Tssr19585 | 2 | 13 | + | TSS region | transcription start site region 19585 | |
Tssr19586 | 2 | 27 | + | TSS region | transcription start site region 19586 | |
Cpgi12096 | 2 | 520 | CpG island | CpG island 12096 | ||
Gm32798 | 2 | 7448 | + | lncRNA gene | predicted gene, 32798 | |
Gm32957 | 2 | 4941 | - | lncRNA gene | predicted gene, 32957 | |
Cpgi12097 | 2 | 937 | CpG island | CpG island 12097 | ||
Bahd1 | 2 | 24151 | + | protein coding gene | bromo adjacent homology domain containing 1 | |
Tssr19587 | 2 | 18 | + | TSS region | transcription start site region 19587 | |
Cpgi12098 | 2 | 2397 | CpG island | CpG island 12098 | ||
Tssr19588 | 2 | 22 | + | TSS region | transcription start site region 19588 | |
Tssr19589 | 2 | 60 | + | TSS region | transcription start site region 19589 | |
Tssr19590 | 2 | 28 | + | TSS region | transcription start site region 19590 | |
Tssr19591 | 2 | 42 | + | TSS region | transcription start site region 19591 | |
Cpgi12099 | 2 | 1068 | CpG island | CpG island 12099 | ||
Tssr19592 | 2 | 58 | + | TSS region | transcription start site region 19592 | |
Chst14 | 2 | 2088 | + | protein coding gene | carbohydrate sulfotransferase 14 | |
Tssr19593 | 2 | 20 | + | TSS region | transcription start site region 19593 | |
Tssr19594 | 2 | 32 | + | TSS region | transcription start site region 19594 | |
Cpgi12100 | 2 | 369 | CpG island | CpG island 12100 | ||
Cpgi12101 | 2 | 926 | CpG island | CpG island 12101 | ||
Gm39914 | 2 | 8736 | - | lncRNA gene | predicted gene, 39914 | |
Tssr19595 | 2 | 3 | + | TSS region | transcription start site region 19595 | |
Gm14089 | 2 | 3616 | + | antisense lncRNA gene | predicted gene 14089 | |
Tssr19596 | 2 | 17 | + | TSS region | transcription start site region 19596 | |
Uqcrh-ps2 | 2 | 268 | + | pseudogene | ubiquinol-cytochrome c reductase hinge protein, pseudogene 2 | |
Ccdc32 | 2 | 11614 | - | protein coding gene | coiled-coil domain containing 32 | |
Cpgi12102 | 2 | 286 | CpG island | CpG island 12102 | ||
Tssr25795 | 2 | 8 | - | TSS region | transcription start site region 25795 | |
Tssr25796 | 2 | 3 | - | TSS region | transcription start site region 25796 | |
Tssr25797 | 2 | 30 | - | TSS region | transcription start site region 25797 | |
Tssr25798 | 2 | 3 | - | TSS region | transcription start site region 25798 | |
Cpgi12103 | 2 | 808 | CpG island | CpG island 12103 | ||
Tssr19597 | 2 | 86 | + | TSS region | transcription start site region 19597 | |
Rpusd2 | 2 | 4979 | + | protein coding gene | RNA pseudouridylate synthase domain containing 2 | |
Tssr19598 | 2 | 7 | + | TSS region | transcription start site region 19598 | |
n-TSgct7 | 2 | 81 | - | tRNA gene | nuclear encoded tRNA serine 7 (anticodon GCT) | |
Cpgi12104 | 2 | 827 | CpG island | CpG island 12104 | ||
Knl1 | 2 | 57791 | + | protein coding gene | kinetochore scaffold 1 | |
Tssr19599 | 2 | 5 | + | TSS region | transcription start site region 19599 | |
Tssr19600 | 2 | 30 | + | TSS region | transcription start site region 19600 | |
Tssr19601 | 2 | 52 | + | TSS region | transcription start site region 19601 | |
Tssr19602 | 2 | 12 | + | TSS region | transcription start site region 19602 | |
n-TIaat12 | 2 | 73 | - | tRNA gene | nuclear encoded tRNA isoleucine 12 (anticodon GAT) | |
D2Mit133 | 2 | 199 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 133 | ||
Estoq1 | 2 | -98171392 | QTL | embryo survival total QTL 1 | ||
W6q1 | 2 | -98171392 | QTL | weight 6 weeks QTL 1 | ||
Splq1 | 2 | -98171392 | QTL | spleen weight QTL 1 | ||
Egq1 | 2 | -98171392 | QTL | early growth QTL 1 | ||
Hrtq1 | 2 | -98171392 | QTL | heart weight QTL 1 | ||
Lvrq1 | 2 | -98171392 | QTL | liver weight QTL 1 | ||
W10q9 | 2 | -98171392 | QTL | weight 10 weeks QTL 9 | ||
Kidq1 | 2 | -98171392 | QTL | kidney weight QTL 1 | ||
W3q1 | 2 | -98171392 | QTL | weight 3 weeks QTL 1 | ||
Cpgi12105 | 2 | 918 | CpG island | CpG island 12105 | ||
Tssr25799 | 2 | 21 | - | TSS region | transcription start site region 25799 | |
Tssr19603 | 2 | 73 | + | TSS region | transcription start site region 19603 | |
Rad51 | 2 | 23253 | + | protein coding gene | RAD51 recombinase | |
Rmdn3 | 2 | 20033 | - | protein coding gene | regulator of microtubule dynamics 3 | |
Cpgi12106 | 2 | 1130 | CpG island | CpG island 12106 | ||
Tssr25800 | 2 | 50 | - | TSS region | transcription start site region 25800 | |
Cpgi12107 | 2 | 931 | CpG island | CpG island 12107 | ||
Tssr19604 | 2 | 21 | + | TSS region | transcription start site region 19604 | |
Tssr19605 | 2 | 53 | + | TSS region | transcription start site region 19605 | |
Gchfr | 2 | 4601 | + | protein coding gene | GTP cyclohydrolase I feedback regulator | |
Dnajc17 | 2 | 36295 | - | protein coding gene | DnaJ heat shock protein family (Hsp40) member C17 | |
Tssr25801 | 2 | 7 | - | TSS region | transcription start site region 25801 | |
Tssr615 | 2 | 17 | + | TSS region | transcription start site region 615 | |
Tssr19606 | 2 | 44 | + | TSS region | transcription start site region 19606 | |
Gm14137 | 2 | 3066 | + | protein coding gene | predicted gene 14137 | |
Tssr19607 | 2 | 11 | + | TSS region | transcription start site region 19607 | |
Tssr25802 | 2 | 30 | - | TSS region | transcription start site region 25802 | |
Tssr616 | 2 | 5 | + | TSS region | transcription start site region 616 | |
Gm14138 | 2 | 741 | + | pseudogene | predicted gene 14138 | |
Cpgi12108 | 2 | 956 | CpG island | CpG island 12108 | ||
Zfyve19 | 2 | 8330 | + | protein coding gene | zinc finger, FYVE domain containing 19 | |
Tssr25803 | 2 | 35 | - | TSS region | transcription start site region 25803 | |
Tssr19608 | 2 | 54 | + | TSS region | transcription start site region 19608 | |
Ppp1r14d | 2 | 11787 | - | protein coding gene | protein phosphatase 1, regulatory inhibitor subunit 14D | |
Tssr25804 | 2 | 16 | - | TSS region | transcription start site region 25804 | |
Tssr25805 | 2 | 28 | - | TSS region | transcription start site region 25805 | |
Tssr25806 | 2 | 28 | - | TSS region | transcription start site region 25806 | |
Tssr25807 | 2 | 12 | - | TSS region | transcription start site region 25807 | |
Tssr25808 | 2 | 11 | - | TSS region | transcription start site region 25808 | |
9130007G19Rik | 2 | 2264 | unclassified gene | RIKEN cDNA 9130007G19 gene | ||
Cpgi12109 | 2 | 1565 | CpG island | CpG island 12109 | ||
Tssr19609 | 2 | 12 | + | TSS region | transcription start site region 19609 | |
Tssr19610 | 2 | 23 | + | TSS region | transcription start site region 19610 | |
Spint1 | 2 | 12165 | + | protein coding gene | serine protease inhibitor, Kunitz type 1 | |
Tssr19611 | 2 | 30 | + | TSS region | transcription start site region 19611 | |
Tssr19612 | 2 | 21 | + | TSS region | transcription start site region 19612 | |
Tssr19613 | 2 | 26 | + | TSS region | transcription start site region 19613 | |
Tssr19614 | 2 | 13 | + | TSS region | transcription start site region 19614 | |
Tssr19615 | 2 | 21 | + | TSS region | transcription start site region 19615 | |
Tssr19616 | 2 | 11 | + | TSS region | transcription start site region 19616 | |
Tssr19617 | 2 | 3 | + | TSS region | transcription start site region 19617 | |
Tssr19618 | 2 | 32 | + | TSS region | transcription start site region 19618 | |
Tssr19619 | 2 | 15 | + | TSS region | transcription start site region 19619 | |
Tssr19620 | 2 | 16 | + | TSS region | transcription start site region 19620 | |
Tssr19621 | 2 | 39 | + | TSS region | transcription start site region 19621 | |
Rhov | 2 | 2071 | - | protein coding gene | ras homolog family member V | |
Cpgi12110 | 2 | 743 | CpG island | CpG island 12110 | ||
Tssr25809 | 2 | 33 | - | TSS region | transcription start site region 25809 | |
Cpgi12111 | 2 | 222 | CpG island | CpG island 12111 | ||
Tssr25810 | 2 | 9 | - | TSS region | transcription start site region 25810 | |
Tssr25811 | 2 | 11 | - | TSS region | transcription start site region 25811 | |
Gm14175 | 2 | 240 | + | pseudogene | predicted gene 14175 | |
Cpgi12112 | 2 | 709 | CpG island | CpG island 12112 | ||
Tssr19622 | 2 | 46 | + | TSS region | transcription start site region 19622 | |
Vps18 | 2 | 9711 | + | protein coding gene | VPS18 CORVET/HOPS core subunit | |
Tssr19623 | 2 | 23 | + | TSS region | transcription start site region 19623 | |
Tssr19624 | 2 | 25 | + | TSS region | transcription start site region 19624 | |
Cpgi12113 | 2 | 1113 | CpG island | CpG island 12113 | ||
Gm14207 | 2 | 4998 | - | lncRNA gene | predicted gene 14207 | |
Cpgi12114 | 2 | 1317 | CpG island | CpG island 12114 | ||
Cpgi12115 | 2 | 807 | CpG island | CpG island 12115 |