Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Gpr176 | 2 | 96309 | - | protein coding gene | G protein-coupled receptor 176 | |
Tssr25769 | 2 | 12 | - | TSS region | transcription start site region 25769 | |
1700054M17Rik | 2 | 3252 | + | antisense lncRNA gene | RIKEN cDNA 1700054M17 gene | |
Tssr25770 | 2 | 8 | - | TSS region | transcription start site region 25770 | |
Tssr19553 | 2 | 6 | + | TSS region | transcription start site region 19553 | |
Gm22651 | 2 | 93 | + | rRNA gene | predicted gene, 22651 | |
Cpgi12077 | 2 | 1579 | CpG island | CpG island 12077 | ||
Tssr25771 | 2 | 32 | - | TSS region | transcription start site region 25771 | |
Tssr25772 | 2 | 32 | - | TSS region | transcription start site region 25772 | |
Tssr25773 | 2 | 22 | - | TSS region | transcription start site region 25773 | |
Cpgi12078 | 2 | 648 | CpG island | CpG island 12078 | ||
Tssr19554 | 2 | 16 | + | TSS region | transcription start site region 19554 | |
Tssr19555 | 2 | 25 | + | TSS region | transcription start site region 19555 | |
Eif2ak4 | 2 | 86616 | + | protein coding gene | eukaryotic translation initiation factor 2 alpha kinase 4 | |
Tssr19556 | 2 | 18 | + | TSS region | transcription start site region 19556 | |
Tssr19557 | 2 | 9 | + | TSS region | transcription start site region 19557 | |
Cpgi12079 | 2 | 457 | CpG island | CpG island 12079 | ||
D2Mit276 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 276 | ||
Tssr19558 | 2 | 3 | + | TSS region | transcription start site region 19558 | |
Srp14 | 2 | 3853 | - | protein coding gene | signal recognition particle 14 | |
Tssr25774 | 2 | 26 | - | TSS region | transcription start site region 25774 | |
Cpgi12080 | 2 | 837 | CpG island | CpG island 12080 | ||
Tssr25775 | 2 | 50 | - | TSS region | transcription start site region 25775 | |
Gm13983 | 2 | 864 | - | pseudogene | predicted gene 13983 | |
Gm32684 | 2 | 2527 | + | lncRNA gene | predicted gene, 32684 | |
Cpgi12081 | 2 | 292 | CpG island | CpG island 12081 | ||
Cfq7 | 2 | 6680661 | QTL | conditioned fear QTL 7 | ||
Bmf | 2 | 20921 | - | protein coding gene | BCL2 modifying factor | |
Tssr25776 | 2 | 5 | - | TSS region | transcription start site region 25776 | |
Cpgi12082 | 2 | 301 | CpG island | CpG island 12082 | ||
Tssr25777 | 2 | 7 | - | TSS region | transcription start site region 25777 | |
Tssr25778 | 2 | 34 | - | TSS region | transcription start site region 25778 | |
Tssr19559 | 2 | 9 | + | TSS region | transcription start site region 19559 | |
Tssr25779 | 2 | 24 | - | TSS region | transcription start site region 25779 | |
Tssr25780 | 2 | 26 | - | TSS region | transcription start site region 25780 | |
Cpgi12083 | 2 | 1003 | CpG island | CpG island 12083 | ||
Tssr25781 | 2 | 30 | - | TSS region | transcription start site region 25781 | |
Tssr25782 | 2 | 15 | - | TSS region | transcription start site region 25782 | |
Tssr19560 | 2 | 5 | + | TSS region | transcription start site region 19560 | |
Tssr19561 | 2 | 3 | + | TSS region | transcription start site region 19561 | |
D2Dcr62 | 2 | 114 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 62 | ||
D2Mit484 | 2 | 111 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 484 | ||
Gm14016 | 2 | 485 | + | pseudogene | predicted gene 14016 | |
Cpgi12084 | 2 | 605 | CpG island | CpG island 12084 | ||
Tssr19562 | 2 | 17 | + | TSS region | transcription start site region 19562 | |
Bub1b | 2 | 43380 | + | protein coding gene | BUB1B, mitotic checkpoint serine/threonine kinase | |
Tssr19563 | 2 | 35 | + | TSS region | transcription start site region 19563 | |
Tssr19564 | 2 | 29 | + | TSS region | transcription start site region 19564 | |
Tssr25783 | 2 | 38 | - | TSS region | transcription start site region 25783 | |
1700008N17Rik | 2 | 1250 | unclassified gene | RIKEN cDNA 1700008N17 gene | ||
Cpgi12085 | 2 | 333 | CpG island | CpG island 12085 | ||
Tssr19565 | 2 | 74 | + | TSS region | transcription start site region 19565 | |
Pak6 | 2 | 34717 | + | protein coding gene | p21 (RAC1) activated kinase 6 | |
Tssr19566 | 2 | 17 | + | TSS region | transcription start site region 19566 | |
Tssr19567 | 2 | 40 | + | TSS region | transcription start site region 19567 | |
Cpgi12086 | 2 | 1392 | CpG island | CpG island 12086 | ||
Tssr613 | 2 | 55 | + | TSS region | transcription start site region 613 | |
Cpgi12087 | 2 | 287 | CpG island | CpG island 12087 | ||
Ankrd63 | 2 | 4860 | - | protein coding gene | ankyrin repeat domain 63 | |
Cpgi12088 | 2 | 331 | CpG island | CpG island 12088 | ||
Cpgi12089 | 2 | 2494 | CpG island | CpG island 12089 | ||
Plcb2 | 2 | 20921 | - | protein coding gene | phospholipase C, beta 2 | |
Tssr25784 | 2 | 11 | - | TSS region | transcription start site region 25784 | |
Tssr19568 | 2 | 17 | + | TSS region | transcription start site region 19568 | |
Cpgi12090 | 2 | 826 | CpG island | CpG island 12090 | ||
Tssr25785 | 2 | 8 | - | TSS region | transcription start site region 25785 | |
Tssr25786 | 2 | 11 | - | TSS region | transcription start site region 25786 | |
Tssr25787 | 2 | 18 | - | TSS region | transcription start site region 25787 | |
Tssr614 | 2 | 11 | - | TSS region | transcription start site region 614 | |
Tssr25788 | 2 | 22 | - | TSS region | transcription start site region 25788 | |
Tssr25789 | 2 | 56 | - | TSS region | transcription start site region 25789 | |
Tssr25790 | 2 | 16 | - | TSS region | transcription start site region 25790 | |
Tssr25791 | 2 | 18 | - | TSS region | transcription start site region 25791 | |
Tssr25792 | 2 | 52 | - | TSS region | transcription start site region 25792 | |
Cpgi12091 | 2 | 1872 | CpG island | CpG island 12091 | ||
Tssr19569 | 2 | 35 | + | TSS region | transcription start site region 19569 | |
Inafm2 | 2 | 3052 | + | protein coding gene | InaF motif containing 2 | |
Tssr19570 | 2 | 22 | + | TSS region | transcription start site region 19570 | |
Tssr19571 | 2 | 4 | + | TSS region | transcription start site region 19571 | |
Tssr19572 | 2 | 2 | + | TSS region | transcription start site region 19572 | |
Ccdc9b | 2 | 8503 | - | protein coding gene | coiled-coil domain containing 9B | |
Pwbwq5 | 2 | 42010473 | QTL | post-weaning body weight QTL 5 | ||
Pwbwq1 | 2 | 42010473 | QTL | pre-weaning body weight QTL 1 | ||
Pwgrq2 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 2 | ||
Pwgrq1 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 1 | ||
Tssr25793 | 2 | 59 | - | TSS region | transcription start site region 25793 | |
Tssr19573 | 2 | 14 | + | TSS region | transcription start site region 19573 | |
Phgr1 | 2 | 5395 | + | protein coding gene | proline/histidine/glycine-rich 1 | |
D2Mit444 | 2 | 174 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 444 | ||
Cpgi12092 | 2 | 651 | CpG island | CpG island 12092 | ||
Tssr19574 | 2 | 11 | + | TSS region | transcription start site region 19574 | |
Disp2 | 2 | 15473 | + | protein coding gene | dispatched RND tramsporter family member 2 | |
Tssr19575 | 2 | 74 | + | TSS region | transcription start site region 19575 | |
Tssr19576 | 2 | 5 | + | TSS region | transcription start site region 19576 | |
Tssr19577 | 2 | 3 | + | TSS region | transcription start site region 19577 | |
Tssr19578 | 2 | 7 | + | TSS region | transcription start site region 19578 | |
Cpgi12093 | 2 | 743 | CpG island | CpG island 12093 | ||
Gm38629 | 2 | 11179 | + | lncRNA gene | predicted gene, 38629 | |
Cpgi12094 | 2 | 782 | CpG island | CpG island 12094 | ||
Knstrn | 2 | 23222 | + | protein coding gene | kinetochore-localized astrin/SPAG5 binding | |
Tssr19579 | 2 | 32 | + | TSS region | transcription start site region 19579 | |
Tssr19580 | 2 | 11 | + | TSS region | transcription start site region 19580 | |
Tssr19581 | 2 | 40 | + | TSS region | transcription start site region 19581 | |
Tssr19582 | 2 | 24 | + | TSS region | transcription start site region 19582 | |
Gm14091 | 2 | 4248 | - | antisense lncRNA gene | predicted gene 14091 | |
Tssr19583 | 2 | 5 | + | TSS region | transcription start site region 19583 | |
Tssr25794 | 2 | 39 | - | TSS region | transcription start site region 25794 | |
Gm39913 | 2 | 24492 | - | lncRNA gene | predicted gene, 39913 | |
Cpgi12095 | 2 | 439 | CpG island | CpG island 12095 | ||
Ivd | 2 | 20948 | + | protein coding gene | isovaleryl coenzyme A dehydrogenase | |
Tssr19584 | 2 | 22 | + | TSS region | transcription start site region 19584 | |
Tssr19585 | 2 | 13 | + | TSS region | transcription start site region 19585 | |
Tssr19586 | 2 | 27 | + | TSS region | transcription start site region 19586 | |
Cpgi12096 | 2 | 520 | CpG island | CpG island 12096 | ||
Gm32798 | 2 | 7448 | + | lncRNA gene | predicted gene, 32798 | |
Gm32957 | 2 | 4941 | - | lncRNA gene | predicted gene, 32957 | |
Cpgi12097 | 2 | 937 | CpG island | CpG island 12097 | ||
Bahd1 | 2 | 24151 | + | protein coding gene | bromo adjacent homology domain containing 1 | |
Tssr19587 | 2 | 18 | + | TSS region | transcription start site region 19587 | |
Cpgi12098 | 2 | 2397 | CpG island | CpG island 12098 | ||
Tssr19588 | 2 | 22 | + | TSS region | transcription start site region 19588 | |
Tssr19589 | 2 | 60 | + | TSS region | transcription start site region 19589 | |
Tssr19590 | 2 | 28 | + | TSS region | transcription start site region 19590 | |
Tssr19591 | 2 | 42 | + | TSS region | transcription start site region 19591 | |
Cpgi12099 | 2 | 1068 | CpG island | CpG island 12099 | ||
Tssr19592 | 2 | 58 | + | TSS region | transcription start site region 19592 | |
Chst14 | 2 | 2088 | + | protein coding gene | carbohydrate sulfotransferase 14 | |
Tssr19593 | 2 | 20 | + | TSS region | transcription start site region 19593 | |
Tssr19594 | 2 | 32 | + | TSS region | transcription start site region 19594 | |
Cpgi12100 | 2 | 369 | CpG island | CpG island 12100 | ||
Cpgi12101 | 2 | 926 | CpG island | CpG island 12101 | ||
Gm39914 | 2 | 8736 | - | lncRNA gene | predicted gene, 39914 | |
Tssr19595 | 2 | 3 | + | TSS region | transcription start site region 19595 | |
Gm14089 | 2 | 3616 | + | antisense lncRNA gene | predicted gene 14089 | |
Tssr19596 | 2 | 17 | + | TSS region | transcription start site region 19596 | |
Uqcrh-ps2 | 2 | 268 | + | pseudogene | ubiquinol-cytochrome c reductase hinge protein, pseudogene 2 | |
Ccdc32 | 2 | 11614 | - | protein coding gene | coiled-coil domain containing 32 | |
Cpgi12102 | 2 | 286 | CpG island | CpG island 12102 | ||
Tssr25795 | 2 | 8 | - | TSS region | transcription start site region 25795 | |
Tssr25796 | 2 | 3 | - | TSS region | transcription start site region 25796 | |
Tssr25797 | 2 | 30 | - | TSS region | transcription start site region 25797 | |
Tssr25798 | 2 | 3 | - | TSS region | transcription start site region 25798 | |
Cpgi12103 | 2 | 808 | CpG island | CpG island 12103 | ||
Tssr19597 | 2 | 86 | + | TSS region | transcription start site region 19597 | |
Rpusd2 | 2 | 4979 | + | protein coding gene | RNA pseudouridylate synthase domain containing 2 | |
Tssr19598 | 2 | 7 | + | TSS region | transcription start site region 19598 | |
n-TSgct7 | 2 | 81 | - | tRNA gene | nuclear encoded tRNA serine 7 (anticodon GCT) | |
Cpgi12104 | 2 | 827 | CpG island | CpG island 12104 | ||
Knl1 | 2 | 57791 | + | protein coding gene | kinetochore scaffold 1 | |
Tssr19599 | 2 | 5 | + | TSS region | transcription start site region 19599 | |
Tssr19600 | 2 | 30 | + | TSS region | transcription start site region 19600 | |
Tssr19601 | 2 | 52 | + | TSS region | transcription start site region 19601 | |
Tssr19602 | 2 | 12 | + | TSS region | transcription start site region 19602 | |
n-TIaat12 | 2 | 73 | - | tRNA gene | nuclear encoded tRNA isoleucine 12 (anticodon GAT) | |
D2Mit133 | 2 | 199 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 133 | ||
W6q1 | 2 | -98171392 | QTL | weight 6 weeks QTL 1 | ||
Splq1 | 2 | -98171392 | QTL | spleen weight QTL 1 | ||
Lvrq1 | 2 | -98171392 | QTL | liver weight QTL 1 | ||
Kidq1 | 2 | -98171392 | QTL | kidney weight QTL 1 | ||
Hrtq1 | 2 | -98171392 | QTL | heart weight QTL 1 | ||
W3q1 | 2 | -98171392 | QTL | weight 3 weeks QTL 1 | ||
Estoq1 | 2 | -98171392 | QTL | embryo survival total QTL 1 | ||
W10q9 | 2 | -98171392 | QTL | weight 10 weeks QTL 9 | ||
Egq1 | 2 | -98171392 | QTL | early growth QTL 1 | ||
Cpgi12105 | 2 | 918 | CpG island | CpG island 12105 | ||
Tssr25799 | 2 | 21 | - | TSS region | transcription start site region 25799 | |
Tssr19603 | 2 | 73 | + | TSS region | transcription start site region 19603 | |
Rad51 | 2 | 23253 | + | protein coding gene | RAD51 recombinase | |
Rmdn3 | 2 | 20033 | - | protein coding gene | regulator of microtubule dynamics 3 | |
Cpgi12106 | 2 | 1130 | CpG island | CpG island 12106 | ||
Tssr25800 | 2 | 50 | - | TSS region | transcription start site region 25800 |