Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:118154914-118458166

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fsip1 2 118130424 to 118256966 126542 - protein coding gene fibrous sheath-interacting protein 1
Tssr25766 2 118218630 to 118218632 2 - TSS region transcription start site region 25766
Gm22800 2 118248689 to 118248782 93 - miRNA gene predicted gene, 22800
Gm29232 2 118253255 to 118279430 26175 - unclassified non-coding RNA gene predicted gene 29232
Cpgi12076 2 118256628 to 118257040 412 CpG island CpG island 12076
Tssr25767 2 118256927 to 118256928 1 - TSS region transcription start site region 25767
Tssr25768 2 118256929 to 118256973 44 - TSS region transcription start site region 25768
A930104D05Rik 2 118270233 to 118276169 5936 - lincRNA gene RIKEN cDNA A930104D05 gene
4930451A11Rik 2 118271138 to 118271773 635 unclassified gene RIKEN cDNA 4930451A11 gene
Gpr176 2 118277110 to 118373419 96309 - protein coding gene G protein-coupled receptor 176
Tssr25769 2 118296926 to 118296938 12 - TSS region transcription start site region 25769
1700054M17Rik 2 118304914 to 118308166 3252 + antisense lncRNA gene RIKEN cDNA 1700054M17 gene
Tssr25770 2 118307676 to 118307684 8 - TSS region transcription start site region 25770
Tssr19553 2 118329036 to 118329042 6 + TSS region transcription start site region 19553
Gm22651 2 118351238 to 118351331 93 + rRNA gene predicted gene, 22651
Cpgi12077 2 118372724 to 118374303 1579 CpG island CpG island 12077
Tssr25771 2 118373309 to 118373341 32 - TSS region transcription start site region 25771
Tssr25772 2 118373347 to 118373379 32 - TSS region transcription start site region 25772
Tssr25773 2 118373985 to 118374007 22 - TSS region transcription start site region 25773
Cpgi12078 2 118388327 to 118388975 648 CpG island CpG island 12078
Tssr19554 2 118388590 to 118388606 16 + TSS region transcription start site region 19554
Tssr19555 2 118388615 to 118388640 25 + TSS region transcription start site region 19555
Eif2ak4 2 118388618 to 118475234 86616 + protein coding gene eukaryotic translation initiation factor 2 alpha kinase 4
Tssr19556 2 118388651 to 118388669 18 + TSS region transcription start site region 19556
Tssr19557 2 118388674 to 118388683 9 + TSS region transcription start site region 19557
Cpgi12079 2 118430792 to 118431249 457 CpG island CpG island 12079
D2Mit276 2 118442067 to 118442203 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 276