Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Actre14 | 2 | 3819720 | QTL | activity response to ethanol 14 | ||
Gm32020 | 2 | 1854 | + | lncRNA gene | predicted gene, 32020 | |
Gm13982 | 2 | 3305 | - | lincRNA gene | predicted gene 13982 | |
Tssr19517 | 2 | 7 | + | TSS region | transcription start site region 19517 | |
Tssr19518 | 2 | 11 | + | TSS region | transcription start site region 19518 | |
Tssr25754 | 2 | 8 | - | TSS region | transcription start site region 25754 | |
Tssr19519 | 2 | 24 | + | TSS region | transcription start site region 19519 | |
Tssr19520 | 2 | 7 | + | TSS region | transcription start site region 19520 | |
Gm32137 | 2 | 10506 | + | lncRNA gene | predicted gene, 32137 | |
Tssr19521 | 2 | 5 | + | TSS region | transcription start site region 19521 | |
D2Mit518 | 2 | 110 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology-518 | ||
Gm32210 | 2 | 53442 | + | lncRNA gene | predicted gene, 32210 | |
Gm28183 | 2 | 1547 | - | lincRNA gene | predicted gene 28183 | |
Gm13985 | 2 | 6135 | - | lincRNA gene | predicted gene 13985 | |
4930412B13Rik | 2 | 87208 | + | lincRNA gene | RIKEN cDNA 4930412B13 gene | |
Gm13986 | 2 | 253911 | - | lncRNA gene | predicted gene 13986 | |
Gm32929 | 2 | 1593 | + | protein coding gene | predicted gene, 32929 | |
Tssr19522 | 2 | 3 | + | TSS region | transcription start site region 19522 | |
Tssr25755 | 2 | 19 | - | TSS region | transcription start site region 25755 | |
Tssr25756 | 2 | 14 | - | TSS region | transcription start site region 25756 | |
Tssr606 | 2 | 34 | + | TSS region | transcription start site region 606 | |
Tssr25757 | 2 | 19 | - | TSS region | transcription start site region 25757 | |
Tssr25758 | 2 | 43 | - | TSS region | transcription start site region 25758 | |
Tssr19523 | 2 | 17 | + | TSS region | transcription start site region 19523 | |
Tssr19524 | 2 | 9 | + | TSS region | transcription start site region 19524 | |
Tssr25759 | 2 | 11 | - | TSS region | transcription start site region 25759 | |
Tssr25760 | 2 | 13 | - | TSS region | transcription start site region 25760 | |
Tssr607 | 2 | 9 | + | TSS region | transcription start site region 607 | |
Tssr19525 | 2 | 16 | + | TSS region | transcription start site region 19525 | |
Tssr19526 | 2 | 16 | + | TSS region | transcription start site region 19526 | |
D2Mit63 | 2 | 209 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 63 | ||
Ignpq1 | 2 | 209 | QTL | IgA nephropathy QTL 1 | ||
Tssr25761 | 2 | 25 | - | TSS region | transcription start site region 25761 | |
Tssr608 | 2 | 7 | - | TSS region | transcription start site region 608 | |
Tssr25762 | 2 | 19 | - | TSS region | transcription start site region 25762 | |
Tssr609 | 2 | 22 | + | TSS region | transcription start site region 609 | |
Tssr25763 | 2 | 32 | - | TSS region | transcription start site region 25763 | |
Tssr25764 | 2 | 8 | - | TSS region | transcription start site region 25764 | |
Tssr610 | 2 | 14 | - | TSS region | transcription start site region 610 | |
Tssr611 | 2 | 9 | - | TSS region | transcription start site region 611 | |
Tssr25765 | 2 | 11 | - | TSS region | transcription start site region 25765 | |
Tssr612 | 2 | 7 | + | TSS region | transcription start site region 612 | |
Gm36979 | 2 | 1637 | + | unclassified gene | predicted gene, 36979 | |
Gm18846 | 2 | 568 | + | pseudogene | predicted gene, 18846 | |
Gm25308 | 2 | 157 | - | snRNA gene | predicted gene, 25308 | |
D2Mit510 | 2 | 218 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology-510 | ||
Cpgi12075 | 2 | 934 | CpG island | CpG island 12075 | ||
Tssr19527 | 2 | 23 | + | TSS region | transcription start site region 19527 | |
Thbs1 | 2 | 15257 | + | protein coding gene | thrombospondin 1 | |
Tssr19528 | 2 | 20 | + | TSS region | transcription start site region 19528 | |
Tssr19529 | 2 | 26 | + | TSS region | transcription start site region 19529 | |
Tbbmd2 | 2 | 160 | QTL | total body bone mineral density 2 | ||
Bglu1 | 2 | 56370621 | QTL | blood glucose level 1 | ||
Fembrs1 | 2 | 160 | QTL | femur breaking strength 1 | ||
D2Mit62 | 2 | 160 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 62 | ||
Gvhd3 | 2 | 160 | QTL | graft-versus host disease 3 | ||
Tssr19530 | 2 | 11 | + | TSS region | transcription start site region 19530 | |
Tssr19531 | 2 | 14 | + | TSS region | transcription start site region 19531 | |
Tssr19532 | 2 | 14 | + | TSS region | transcription start site region 19532 | |
Tssr19533 | 2 | 32 | + | TSS region | transcription start site region 19533 | |
Tssr19534 | 2 | 23 | + | TSS region | transcription start site region 19534 | |
Tssr19535 | 2 | 12 | + | TSS region | transcription start site region 19535 | |
Tssr19536 | 2 | 18 | + | TSS region | transcription start site region 19536 | |
Tssr19537 | 2 | 41 | + | TSS region | transcription start site region 19537 | |
Tssr19538 | 2 | 14 | + | TSS region | transcription start site region 19538 | |
Tssr19539 | 2 | 13 | + | TSS region | transcription start site region 19539 | |
Tssr19540 | 2 | 16 | + | TSS region | transcription start site region 19540 | |
Tssr19541 | 2 | 12 | + | TSS region | transcription start site region 19541 | |
Tssr19542 | 2 | 14 | + | TSS region | transcription start site region 19542 | |
Gm29233 | 2 | 596 | - | lincRNA gene | predicted gene 29233 | |
Tssr19543 | 2 | 10 | + | TSS region | transcription start site region 19543 | |
Tssr19544 | 2 | 22 | + | TSS region | transcription start site region 19544 | |
Tssr19545 | 2 | 12 | + | TSS region | transcription start site region 19545 | |
Tssr19546 | 2 | 11 | + | TSS region | transcription start site region 19546 | |
Tssr19547 | 2 | 11 | + | TSS region | transcription start site region 19547 | |
Tssr19548 | 2 | 14 | + | TSS region | transcription start site region 19548 | |
Tssr19549 | 2 | 33 | + | TSS region | transcription start site region 19549 | |
Tssr19550 | 2 | 19 | + | TSS region | transcription start site region 19550 | |
Tssr19551 | 2 | 47 | + | TSS region | transcription start site region 19551 | |
Tssr19552 | 2 | 65 | + | TSS region | transcription start site region 19552 | |
Fsip1 | 2 | 126542 | - | protein coding gene | fibrous sheath-interacting protein 1 | |
Tssr25766 | 2 | 2 | - | TSS region | transcription start site region 25766 | |
Gm22800 | 2 | 93 | - | miRNA gene | predicted gene, 22800 | |
Gm29232 | 2 | 26175 | - | unclassified non-coding RNA gene | predicted gene 29232 | |
Cpgi12076 | 2 | 412 | CpG island | CpG island 12076 | ||
Tssr25767 | 2 | 1 | - | TSS region | transcription start site region 25767 | |
Tssr25768 | 2 | 44 | - | TSS region | transcription start site region 25768 | |
A930104D05Rik | 2 | 5936 | - | lincRNA gene | RIKEN cDNA A930104D05 gene | |
4930451A11Rik | 2 | 635 | unclassified gene | RIKEN cDNA 4930451A11 gene | ||
Gpr176 | 2 | 96309 | - | protein coding gene | G protein-coupled receptor 176 | |
Tssr25769 | 2 | 12 | - | TSS region | transcription start site region 25769 | |
1700054M17Rik | 2 | 3252 | + | antisense lncRNA gene | RIKEN cDNA 1700054M17 gene | |
Tssr25770 | 2 | 8 | - | TSS region | transcription start site region 25770 | |
Tssr19553 | 2 | 6 | + | TSS region | transcription start site region 19553 | |
Gm22651 | 2 | 93 | + | rRNA gene | predicted gene, 22651 | |
Cpgi12077 | 2 | 1579 | CpG island | CpG island 12077 | ||
Tssr25771 | 2 | 32 | - | TSS region | transcription start site region 25771 | |
Tssr25772 | 2 | 32 | - | TSS region | transcription start site region 25772 | |
Tssr25773 | 2 | 22 | - | TSS region | transcription start site region 25773 | |
Cpgi12078 | 2 | 648 | CpG island | CpG island 12078 | ||
Tssr19554 | 2 | 16 | + | TSS region | transcription start site region 19554 | |
Tssr19555 | 2 | 25 | + | TSS region | transcription start site region 19555 | |
Eif2ak4 | 2 | 86616 | + | protein coding gene | eukaryotic translation initiation factor 2 alpha kinase 4 | |
Tssr19556 | 2 | 18 | + | TSS region | transcription start site region 19556 | |
Tssr19557 | 2 | 9 | + | TSS region | transcription start site region 19557 | |
Cpgi12079 | 2 | 457 | CpG island | CpG island 12079 | ||
D2Mit276 | 2 | 136 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 276 | ||
Tssr19558 | 2 | 3 | + | TSS region | transcription start site region 19558 | |
Srp14 | 2 | 3853 | - | protein coding gene | signal recognition particle 14 | |
Tssr25774 | 2 | 26 | - | TSS region | transcription start site region 25774 | |
Cpgi12080 | 2 | 837 | CpG island | CpG island 12080 | ||
Tssr25775 | 2 | 50 | - | TSS region | transcription start site region 25775 | |
Gm13983 | 2 | 864 | - | pseudogene | predicted gene 13983 | |
Gm32684 | 2 | 2527 | + | lncRNA gene | predicted gene, 32684 | |
Cpgi12081 | 2 | 292 | CpG island | CpG island 12081 | ||
Cfq7 | 2 | 6680661 | QTL | conditioned fear QTL 7 | ||
Bmf | 2 | 20921 | - | protein coding gene | BCL2 modifying factor | |
Tssr25776 | 2 | 5 | - | TSS region | transcription start site region 25776 | |
Cpgi12082 | 2 | 301 | CpG island | CpG island 12082 | ||
Tssr25777 | 2 | 7 | - | TSS region | transcription start site region 25777 | |
Tssr25778 | 2 | 34 | - | TSS region | transcription start site region 25778 | |
Tssr19559 | 2 | 9 | + | TSS region | transcription start site region 19559 | |
Tssr25779 | 2 | 24 | - | TSS region | transcription start site region 25779 | |
Tssr25780 | 2 | 26 | - | TSS region | transcription start site region 25780 | |
Cpgi12083 | 2 | 1003 | CpG island | CpG island 12083 | ||
Tssr25781 | 2 | 30 | - | TSS region | transcription start site region 25781 | |
Tssr25782 | 2 | 15 | - | TSS region | transcription start site region 25782 | |
Tssr19560 | 2 | 5 | + | TSS region | transcription start site region 19560 | |
Tssr19561 | 2 | 3 | + | TSS region | transcription start site region 19561 | |
D2Dcr62 | 2 | 114 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 62 | ||
D2Mit484 | 2 | 111 | DNA segment | DNA Segment, Chr 2 Massachusetts Institute of Technology 484 | ||
Gm14016 | 2 | 485 | + | pseudogene | predicted gene 14016 | |
Cpgi12084 | 2 | 605 | CpG island | CpG island 12084 | ||
Tssr19562 | 2 | 17 | + | TSS region | transcription start site region 19562 | |
Bub1b | 2 | 43380 | + | protein coding gene | BUB1B, mitotic checkpoint serine/threonine kinase | |
Tssr19563 | 2 | 35 | + | TSS region | transcription start site region 19563 | |
Tssr19564 | 2 | 29 | + | TSS region | transcription start site region 19564 | |
Tssr25783 | 2 | 38 | - | TSS region | transcription start site region 25783 | |
1700008N17Rik | 2 | 1250 | unclassified gene | RIKEN cDNA 1700008N17 gene | ||
Cpgi12085 | 2 | 333 | CpG island | CpG island 12085 | ||
Tssr19565 | 2 | 74 | + | TSS region | transcription start site region 19565 | |
Pak6 | 2 | 34717 | + | protein coding gene | p21 (RAC1) activated kinase 6 | |
Tssr19566 | 2 | 17 | + | TSS region | transcription start site region 19566 | |
Tssr19567 | 2 | 40 | + | TSS region | transcription start site region 19567 | |
Cpgi12086 | 2 | 1392 | CpG island | CpG island 12086 | ||
Tssr613 | 2 | 55 | + | TSS region | transcription start site region 613 | |
Cpgi12087 | 2 | 287 | CpG island | CpG island 12087 | ||
Ankrd63 | 2 | 4860 | - | protein coding gene | ankyrin repeat domain 63 | |
Cpgi12088 | 2 | 331 | CpG island | CpG island 12088 | ||
Cpgi12089 | 2 | 2494 | CpG island | CpG island 12089 | ||
Plcb2 | 2 | 20921 | - | protein coding gene | phospholipase C, beta 2 | |
Tssr25784 | 2 | 11 | - | TSS region | transcription start site region 25784 | |
Tssr19568 | 2 | 17 | + | TSS region | transcription start site region 19568 | |
Cpgi12090 | 2 | 826 | CpG island | CpG island 12090 | ||
Tssr25785 | 2 | 8 | - | TSS region | transcription start site region 25785 | |
Tssr25786 | 2 | 11 | - | TSS region | transcription start site region 25786 | |
Tssr25787 | 2 | 18 | - | TSS region | transcription start site region 25787 | |
Tssr614 | 2 | 11 | - | TSS region | transcription start site region 614 | |
Tssr25788 | 2 | 22 | - | TSS region | transcription start site region 25788 | |
Tssr25789 | 2 | 56 | - | TSS region | transcription start site region 25789 | |
Tssr25790 | 2 | 16 | - | TSS region | transcription start site region 25790 | |
Tssr25791 | 2 | 18 | - | TSS region | transcription start site region 25791 | |
Tssr25792 | 2 | 52 | - | TSS region | transcription start site region 25792 | |
Cpgi12091 | 2 | 1872 | CpG island | CpG island 12091 | ||
Tssr19569 | 2 | 35 | + | TSS region | transcription start site region 19569 | |
Inafm2 | 2 | 3052 | + | protein coding gene | InaF motif containing 2 | |
Tssr19570 | 2 | 22 | + | TSS region | transcription start site region 19570 | |
Tssr19571 | 2 | 4 | + | TSS region | transcription start site region 19571 | |
Tssr19572 | 2 | 2 | + | TSS region | transcription start site region 19572 | |
Ccdc9b | 2 | 8503 | - | protein coding gene | coiled-coil domain containing 9B | |
Pwgrq1 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 1 | ||
Pwbwq1 | 2 | 42010473 | QTL | pre-weaning body weight QTL 1 | ||
Pwbwq5 | 2 | 42010473 | QTL | post-weaning body weight QTL 5 | ||
Pwgrq2 | 2 | 42010473 | QTL | pre-weaning growth rate QTL 2 | ||
Tssr25793 | 2 | 59 | - | TSS region | transcription start site region 25793 | |
Tssr19573 | 2 | 14 | + | TSS region | transcription start site region 19573 | |
Phgr1 | 2 | 5395 | + | protein coding gene | proline/histidine/glycine-rich 1 | |
D2Mit444 | 2 | 174 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 444 | ||
Cpgi12092 | 2 | 651 | CpG island | CpG island 12092 | ||
Tssr19574 | 2 | 11 | + | TSS region | transcription start site region 19574 | |
Disp2 | 2 | 15473 | + | protein coding gene | dispatched RND tramsporter family member 2 | |
Tssr19575 | 2 | 74 | + | TSS region | transcription start site region 19575 | |
Tssr19576 | 2 | 5 | + | TSS region | transcription start site region 19576 | |
Tssr19577 | 2 | 3 | + | TSS region | transcription start site region 19577 | |
Tssr19578 | 2 | 7 | + | TSS region | transcription start site region 19578 | |
Cpgi12093 | 2 | 743 | CpG island | CpG island 12093 | ||
Gm38629 | 2 | 11179 | + | lncRNA gene | predicted gene, 38629 | |
Cpgi12094 | 2 | 782 | CpG island | CpG island 12094 | ||
Knstrn | 2 | 23222 | + | protein coding gene | kinetochore-localized astrin/SPAG5 binding | |
Tssr19579 | 2 | 32 | + | TSS region | transcription start site region 19579 | |
Tssr19580 | 2 | 11 | + | TSS region | transcription start site region 19580 | |
Tssr19581 | 2 | 40 | + | TSS region | transcription start site region 19581 | |
Tssr19582 | 2 | 24 | + | TSS region | transcription start site region 19582 | |
Gm14091 | 2 | 4248 | - | antisense lncRNA gene | predicted gene 14091 | |
Tssr19583 | 2 | 5 | + | TSS region | transcription start site region 19583 | |
Tssr25794 | 2 | 39 | - | TSS region | transcription start site region 25794 | |
Gm39913 | 2 | 24492 | - | lncRNA gene | predicted gene, 39913 | |
Cpgi12095 | 2 | 439 | CpG island | CpG island 12095 | ||
Ivd | 2 | 20948 | + | protein coding gene | isovaleryl coenzyme A dehydrogenase | |
Tssr19584 | 2 | 22 | + | TSS region | transcription start site region 19584 |