Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:117172823-117892933

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spred1 2 117121374 to 117182279 60905 + protein coding gene sprouty protein with EVH-1 domain 1, related sequence
Tssr19507 2 117178620 to 117178633 13 + TSS region transcription start site region 19507
Tssr19508 2 117179304 to 117179321 17 + TSS region transcription start site region 19508
Tssr19509 2 117179365 to 117179380 15 + TSS region transcription start site region 19509
Tssr19510 2 117179486 to 117179513 27 + TSS region transcription start site region 19510
Tssr19511 2 117181259 to 117181272 13 + TSS region transcription start site region 19511
Tssr19512 2 117181752 to 117181764 12 + TSS region transcription start site region 19512
Mir674 2 117185127 to 117185226 99 + miRNA gene microRNA 674
Gm18612 2 117238741 to 117239468 727 + pseudogene predicted gene, 18612
Rap1a-ps2 2 117240883 to 117241441 558 + pseudogene RAS related protein 1a, pseudogene 2
Gm25189 2 117248271 to 117248434 163 + snRNA gene predicted gene, 25189
Cpgi12073 2 117249592 to 117250348 756 CpG island CpG island 12073
Tssr19513 2 117249725 to 117249754 29 + TSS region transcription start site region 19513
Fam98b 2 117249739 to 117271540 21801 + protein coding gene family with sequence similarity 98, member B
Tssr19514 2 117249766 to 117249773 7 + TSS region transcription start site region 19514
Tssr19515 2 117249778 to 117249779 1 + TSS region transcription start site region 19515
Rasgrp1 2 117279993 to 117342877 62884 - protein coding gene RAS guanyl releasing protein 1
Tssr25741 2 117298152 to 117298195 43 - TSS region transcription start site region 25741
Tssr25742 2 117298926 to 117298970 44 - TSS region transcription start site region 25742
Tssr25743 2 117305772 to 117305777 5 - TSS region transcription start site region 25743
Tssr25744 2 117319610 to 117319616 6 - TSS region transcription start site region 25744
Tssr25745 2 117331092 to 117331097 5 - TSS region transcription start site region 25745
Tssr25746 2 117336394 to 117336405 11 - TSS region transcription start site region 25746
Tssr25747 2 117338477 to 117338488 11 - TSS region transcription start site region 25747
Tssr25748 2 117338527 to 117338594 67 - TSS region transcription start site region 25748
Cpgi12074 2 117341893 to 117343426 1533 CpG island CpG island 12074
Tssr19516 2 117342391 to 117342395 4 + TSS region transcription start site region 19516
Tssr25749 2 117342819 to 117342822 3 - TSS region transcription start site region 25749
Tssr25750 2 117342831 to 117342896 65 - TSS region transcription start site region 25750
Tssr25751 2 117342900 to 117342909 9 - TSS region transcription start site region 25751
Tssr25752 2 117342915 to 117342928 13 - TSS region transcription start site region 25752
Tssr25753 2 117342949 to 117342966 17 - TSS region transcription start site region 25753
Gm32020 2 117359388 to 117361242 1854 + lncRNA gene predicted gene, 32020
Gm13982 2 117414392 to 117417697 3305 - lincRNA gene predicted gene 13982
Tssr19517 2 117417780 to 117417787 7 + TSS region transcription start site region 19517
Tssr19518 2 117417791 to 117417802 11 + TSS region transcription start site region 19518
Tssr25754 2 117418720 to 117418728 8 - TSS region transcription start site region 25754
Tssr19519 2 117421646 to 117421670 24 + TSS region transcription start site region 19519
Tssr19520 2 117421674 to 117421681 7 + TSS region transcription start site region 19520
Gm32137 2 117439984 to 117450490 10506 + lncRNA gene predicted gene, 32137
Tssr19521 2 117449020 to 117449025 5 + TSS region transcription start site region 19521
D2Mit518 2 117532823 to 117532933 110 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology-518
Gm32210 2 117704951 to 117758393 53442 + lncRNA gene predicted gene, 32210
Gm28183 2 117802117 to 117803664 1547 - lincRNA gene predicted gene 28183
Gm13985 2 117806678 to 117812813 6135 - lincRNA gene predicted gene 13985
4930412B13Rik 2 117821928 to 117909136 87208 + lincRNA gene RIKEN cDNA 4930412B13 gene
Gm13986 2 117857291 to 118111202 253911 - lncRNA gene predicted gene 13986
Gm32929 2 117865629 to 117867222 1593 + protein coding gene predicted gene, 32929
Tssr19522 2 117886398 to 117886401 3 + TSS region transcription start site region 19522