Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:117159739-117361540

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spred1 2 117121374 to 117182279 60905 + protein coding gene sprouty protein with EVH-1 domain 1, related sequence
Tssr19504 2 117159857 to 117159865 8 + TSS region transcription start site region 19504
Tssr19505 2 117161812 to 117161817 5 + TSS region transcription start site region 19505
Tssr19506 2 117162567 to 117162575 8 + TSS region transcription start site region 19506
Tssr19507 2 117178620 to 117178633 13 + TSS region transcription start site region 19507
Tssr19508 2 117179304 to 117179321 17 + TSS region transcription start site region 19508
Tssr19509 2 117179365 to 117179380 15 + TSS region transcription start site region 19509
Tssr19510 2 117179486 to 117179513 27 + TSS region transcription start site region 19510
Tssr19511 2 117181259 to 117181272 13 + TSS region transcription start site region 19511
Tssr19512 2 117181752 to 117181764 12 + TSS region transcription start site region 19512
Mir674 2 117185127 to 117185226 99 + miRNA gene microRNA 674
Gm18612 2 117238741 to 117239468 727 + pseudogene predicted gene, 18612
Rap1a-ps2 2 117240883 to 117241441 558 + pseudogene RAS related protein 1a, pseudogene 2
Gm25189 2 117248271 to 117248434 163 + snRNA gene predicted gene, 25189
Cpgi12073 2 117249592 to 117250348 756 CpG island CpG island 12073
Tssr19513 2 117249725 to 117249754 29 + TSS region transcription start site region 19513
Fam98b 2 117249739 to 117271540 21801 + protein coding gene family with sequence similarity 98, member B
Tssr19514 2 117249766 to 117249773 7 + TSS region transcription start site region 19514
Tssr19515 2 117249778 to 117249779 1 + TSS region transcription start site region 19515
Rasgrp1 2 117279993 to 117342877 62884 - protein coding gene RAS guanyl releasing protein 1
Tssr25741 2 117298152 to 117298195 43 - TSS region transcription start site region 25741
Tssr25742 2 117298926 to 117298970 44 - TSS region transcription start site region 25742
Tssr25743 2 117305772 to 117305777 5 - TSS region transcription start site region 25743
Tssr25744 2 117319610 to 117319616 6 - TSS region transcription start site region 25744
Tssr25745 2 117331092 to 117331097 5 - TSS region transcription start site region 25745
Tssr25746 2 117336394 to 117336405 11 - TSS region transcription start site region 25746
Tssr25747 2 117338477 to 117338488 11 - TSS region transcription start site region 25747
Tssr25748 2 117338527 to 117338594 67 - TSS region transcription start site region 25748
Cpgi12074 2 117341893 to 117343426 1533 CpG island CpG island 12074
Tssr19516 2 117342391 to 117342395 4 + TSS region transcription start site region 19516
Tssr25749 2 117342819 to 117342822 3 - TSS region transcription start site region 25749
Tssr25750 2 117342831 to 117342896 65 - TSS region transcription start site region 25750
Tssr25751 2 117342900 to 117342909 9 - TSS region transcription start site region 25751
Tssr25752 2 117342915 to 117342928 13 - TSS region transcription start site region 25752
Tssr25753 2 117342949 to 117342966 17 - TSS region transcription start site region 25753
Gm32020 2 117359388 to 117361242 1854 + lncRNA gene predicted gene, 32020