Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:11662688-11714588

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il2ra 2 11642807 to 11693193 50386 + protein coding gene interleukin 2 receptor, alpha chain
Tssr16139 2 11666407 to 11666413 6 + TSS region transcription start site region 16139
Tssr16140 2 11667567 to 11667570 3 + TSS region transcription start site region 16140
Tssr22656 2 11671120 to 11671126 6 - TSS region transcription start site region 22656
Tssr22657 2 11676923 to 11676944 21 - TSS region transcription start site region 22657
Tssr16141 2 11678188 to 11678207 19 + TSS region transcription start site region 16141
Gm39760 2 11682688 to 11694588 11900 - lncRNA gene predicted gene, 39760
Gm37881 2 11683126 to 11683546 420 + unclassified gene predicted gene, 37881
Tssr16142 2 11689808 to 11689825 17 + TSS region transcription start site region 16142
Tssr16143 2 11689844 to 11689855 11 + TSS region transcription start site region 16143
Tssr16144 2 11689862 to 11689880 18 + TSS region transcription start site region 16144
Tssr16145 2 11689884 to 11689901 17 + TSS region transcription start site region 16145
Tssr16146 2 11689941 to 11689975 34 + TSS region transcription start site region 16146
Tssr16147 2 11690001 to 11690023 22 + TSS region transcription start site region 16147
Tssr16148 2 11690060 to 11690091 31 + TSS region transcription start site region 16148
Tssr16149 2 11690096 to 11690134 38 + TSS region transcription start site region 16149
Tssr16150 2 11690140 to 11690191 51 + TSS region transcription start site region 16150
Tssr16151 2 11690640 to 11690655 15 + TSS region transcription start site region 16151
Tssr16152 2 11690946 to 11691024 78 + TSS region transcription start site region 16152
Gm39759 2 11693584 to 11699526 5942 + lncRNA gene predicted gene, 39759
Tssr16153 2 11697993 to 11697997 4 + TSS region transcription start site region 16153
Il15ra 2 11705169 to 11733985 28816 + protein coding gene interleukin 15 receptor, alpha chain
Cpgi11206 2 11705315 to 11706286 971 CpG island CpG island 11206
Tssr16154 2 11705320 to 11705346 26 + TSS region transcription start site region 16154
Tssr16155 2 11705355 to 11705375 20 + TSS region transcription start site region 16155
Tssr16156 2 11705390 to 11705401 11 + TSS region transcription start site region 16156
Tssr16157 2 11705437 to 11705448 11 + TSS region transcription start site region 16157
Tssr16158 2 11705459 to 11705464 5 + TSS region transcription start site region 16158
Tssr16159 2 11705730 to 11705767 37 + TSS region transcription start site region 16159
Tssr16160 2 11705823 to 11705832 9 + TSS region transcription start site region 16160
Tssr16161 2 11712038 to 11712043 5 + TSS region transcription start site region 16161
Tssr16162 2 11713230 to 11713242 12 + TSS region transcription start site region 16162