Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:116047843-117008490

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66 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Meis2 2 115863064 to 116065839 202775 - protein coding gene Meis homeobox 2
Tssr25717 2 116049109 to 116049129 20 - TSS region transcription start site region 25717
Tssr25718 2 116058788 to 116058799 11 - TSS region transcription start site region 25718
Cpgi12064 2 116060324 to 116060544 220 CpG island CpG island 12064
Cpgi12065 2 116061421 to 116061727 306 CpG island CpG island 12065
Cpgi12066 2 116062167 to 116062461 294 CpG island CpG island 12066
Tssr25719 2 116062514 to 116062562 48 - TSS region transcription start site region 25719
Cpgi12067 2 116063033 to 116064712 1679 CpG island CpG island 12067
Tssr25720 2 116063848 to 116063900 52 - TSS region transcription start site region 25720
Tssr25721 2 116064558 to 116064598 40 - TSS region transcription start site region 25721
Tssr25722 2 116064733 to 116064749 16 - TSS region transcription start site region 25722
Tssr25723 2 116064759 to 116064771 12 - TSS region transcription start site region 25723
Tssr25724 2 116065128 to 116065133 5 - TSS region transcription start site region 25724
Tssr25725 2 116065217 to 116065238 21 - TSS region transcription start site region 25725
Cpgi12068 2 116065532 to 116066002 470 CpG island CpG island 12068
Tssr25726 2 116065645 to 116065656 11 - TSS region transcription start site region 25726
Tssr25727 2 116065673 to 116065689 16 - TSS region transcription start site region 25727
Tssr25728 2 116065691 to 116065705 14 - TSS region transcription start site region 25728
Tssr25729 2 116065718 to 116065735 17 - TSS region transcription start site region 25729
Tssr25730 2 116065785 to 116065796 11 - TSS region transcription start site region 25730
Tssr25731 2 116065798 to 116065853 55 - TSS region transcription start site region 25731
Tssr25732 2 116065944 to 116065965 21 - TSS region transcription start site region 25732
Tssr25733 2 116066034 to 116066063 29 - TSS region transcription start site region 25733
2700033N17Rik 2 116066218 to 116067444 1226 - lincRNA gene RIKEN cDNA 2700033N17 gene
Cpgi12069 2 116066537 to 116067395 858 CpG island CpG island 12069
Tssr25734 2 116067125 to 116067141 16 - TSS region transcription start site region 25734
Tssr25735 2 116067155 to 116067185 30 - TSS region transcription start site region 25735
Tssr19467 2 116067213 to 116067250 37 + TSS region transcription start site region 19467
G630016G05Rik 2 116067225 to 116085911 18686 + lincRNA gene RIKEN cDNA G630016G05 gene
Tssr25736 2 116067355 to 116067366 11 - TSS region transcription start site region 25736
Tssr25737 2 116067391 to 116067409 18 - TSS region transcription start site region 25737
Tssr19468 2 116067933 to 116067975 42 + TSS region transcription start site region 19468
Tssr19469 2 116073883 to 116073885 2 + TSS region transcription start site region 19469
2810405F15Rik 2 116075165 to 116076096 931 - lncRNA gene RIKEN cDNA 2810405F15 gene
Cpgi12070 2 116075469 to 116076055 586 CpG island CpG island 12070
Aabpr 2 116202748 to 122377053 6174305 QTL aberrant activation of B cell proliferation
D2Mit254 2 116202748 to 116202940 192 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 254
D2Dcr61 2 116202752 to 116202923 171 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 61
D2Mit254.3 2 116202891 to 116203020 129 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 254.3
Tssr25738 2 116397348 to 116397357 9 - TSS region transcription start site region 25738
Gm13991 2 116527843 to 116528490 647 - pseudogene predicted gene 13991
D2Mit443 2 116785469 to 116785572 103 DNA segment DNA Segment, Chr 2, Massachusetts Institute of Technology 443
D2Mit189.2 2 116812833 to 116812957 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 189.2
D2Mit189 2 116812962 to 116813081 119 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 189
Gm13990 2 116848099 to 116877168 29069 - antisense lncRNA gene predicted gene 13990
Tssr19470 2 116878672 to 116878682 10 + TSS region transcription start site region 19470
Tssr19471 2 116878686 to 116878696 10 + TSS region transcription start site region 19471
Tmco5 2 116878691 to 116892494 13803 + protein coding gene transmembrane and coiled-coil domains 5
Tssr19472 2 116878698 to 116878743 45 + TSS region transcription start site region 19472
Gm46758 2 116893984 to 116905886 11902 - lncRNA gene predicted gene, 46758
Tssr19473 2 116899744 to 116899751 7 + TSS region transcription start site region 19473
D330050G23Rik 2 116900152 to 116912791 12639 + lincRNA gene RIKEN cDNA D330050G23 gene
Tssr19474 2 116900200 to 116900216 16 + TSS region transcription start site region 19474
Tssr19475 2 116914271 to 116914277 6 + TSS region transcription start site region 19475
Gm31906 2 116914702 to 116917648 2946 - lncRNA gene predicted gene, 31906
Tssr604 2 116925469 to 116925471 2 + TSS region transcription start site region 604
Gm24914 2 116963237 to 116963549 312 + unclassified non-coding RNA gene predicted gene, 24914
Gm25514 2 116968039 to 116968173 134 - snRNA gene predicted gene, 25514
Tssr19476 2 116972377 to 116972399 22 + TSS region transcription start site region 19476
Tssr19477 2 116972405 to 116972420 15 + TSS region transcription start site region 19477
Gm29340 2 116972575 to 116976428 3853 - lincRNA gene predicted gene 29340
Tssr19478 2 116972832 to 116972847 15 + TSS region transcription start site region 19478
Cpgi12071 2 116975516 to 116976188 672 CpG island CpG island 12071
D2Mit103 2 116978791 to 116978935 144 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 103
Tssr605 2 116989569 to 116989584 15 + TSS region transcription start site region 605
Tssr25739 2 116999653 to 116999657 4 - TSS region transcription start site region 25739