Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:11498375-11628534

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pfkfb3 2 11471430 to 11554071 82641 - protein coding gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
Tssr22628 2 11498380 to 11498400 20 - TSS region transcription start site region 22628
Tssr22629 2 11498401 to 11498414 13 - TSS region transcription start site region 22629
Tssr22630 2 11498443 to 11498454 11 - TSS region transcription start site region 22630
Tssr22631 2 11499561 to 11499565 4 - TSS region transcription start site region 22631
Tssr22632 2 11499913 to 11499927 14 - TSS region transcription start site region 22632
Cpgi11200 2 11501067 to 11502634 1567 CpG island CpG island 11200
Tssr22633 2 11501717 to 11501728 11 - TSS region transcription start site region 22633
Tssr22634 2 11502032 to 11502049 17 - TSS region transcription start site region 22634
Tssr22635 2 11502050 to 11502061 11 - TSS region transcription start site region 22635
Tssr22636 2 11502069 to 11502080 11 - TSS region transcription start site region 22636
Tssr22637 2 11502092 to 11502126 34 - TSS region transcription start site region 22637
Cpgi11201 2 11502837 to 11503446 609 CpG island CpG island 11201
Tssr22638 2 11513174 to 11513196 22 - TSS region transcription start site region 22638
Tssr22639 2 11513212 to 11513229 17 - TSS region transcription start site region 22639
Gm10851 2 11521524 to 11529986 8462 + antisense lncRNA gene predicted gene 10851
Tssr16124 2 11521700 to 11521714 14 + TSS region transcription start site region 16124
Tssr407 2 11522026 to 11522048 22 + TSS region transcription start site region 407
Tssr16125 2 11522076 to 11522095 19 + TSS region transcription start site region 16125
D2Mit357 2 11523588 to 11523712 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 357
Gm37975 2 11532596 to 11534694 2098 - unclassified gene predicted gene, 37975
Cpgi11202 2 11535333 to 11535874 541 CpG island CpG island 11202
Tssr22640 2 11535519 to 11535557 38 - TSS region transcription start site region 22640
Tssr16126 2 11535710 to 11535721 11 + TSS region transcription start site region 16126
Cpgi11203 2 11553210 to 11554216 1006 CpG island CpG island 11203
Tssr22641 2 11553893 to 11553961 68 - TSS region transcription start site region 22641
Tssr16127 2 11554023 to 11554040 17 + TSS region transcription start site region 16127
Cpgi11204 2 11563375 to 11563534 159 CpG island CpG island 11204
Rbm17 2 11585439 to 11603199 17760 - protein coding gene RNA binding motif protein 17
Tssr22642 2 11596716 to 11596745 29 - TSS region transcription start site region 22642
Cpgi11205 2 11602496 to 11603442 946 CpG island CpG island 11205
Tssr22643 2 11603192 to 11603268 76 - TSS region transcription start site region 22643
Tssr22644 2 11605035 to 11605038 3 - TSS region transcription start site region 22644
Gm13260 2 11607417 to 11608537 1120 - pseudogene predicted gene 13260
Tssr22645 2 11620497 to 11620523 26 - TSS region transcription start site region 22645
Gm17490 2 11625606 to 11626264 658 - protein coding gene predicted gene, 17490
Tssr16128 2 11626173 to 11626202 29 + TSS region transcription start site region 16128