Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:114050299-114300317

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Actc1 2 114047282 to 114052875 5593 - protein coding gene actin, alpha, cardiac muscle 1
Tssr19437 2 114050285 to 114050304 19 + TSS region transcription start site region 19437
Tssr25678 2 114050336 to 114050344 8 - TSS region transcription start site region 25678
Tssr25679 2 114050345 to 114050354 9 - TSS region transcription start site region 25679
Tssr25680 2 114050358 to 114050365 7 - TSS region transcription start site region 25680
Tssr19438 2 114050368 to 114050420 52 + TSS region transcription start site region 19438
Tssr25681 2 114050405 to 114050449 44 - TSS region transcription start site region 25681
Tssr19439 2 114050433 to 114050453 20 + TSS region transcription start site region 19439
Tssr602 2 114050477 to 114050480 3 - TSS region transcription start site region 602
Tssr25682 2 114050487 to 114050488 1 - TSS region transcription start site region 25682
Tssr25683 2 114050494 to 114050497 3 - TSS region transcription start site region 25683
Tssr25684 2 114050585 to 114050615 30 - TSS region transcription start site region 25684
Tssr25685 2 114050955 to 114050966 11 - TSS region transcription start site region 25685
Tssr25686 2 114051298 to 114051312 14 - TSS region transcription start site region 25686
Tssr25687 2 114051929 to 114051982 53 - TSS region transcription start site region 25687
Tssr25688 2 114051993 to 114052027 34 - TSS region transcription start site region 25688
Tssr25689 2 114052059 to 114052071 12 - TSS region transcription start site region 25689
Tssr25690 2 114052077 to 114052087 10 - TSS region transcription start site region 25690
Tssr25691 2 114052199 to 114052203 4 - TSS region transcription start site region 25691
Tssr25692 2 114052804 to 114052818 14 - TSS region transcription start site region 25692
Tssr25693 2 114053515 to 114053562 47 - TSS region transcription start site region 25693
Tssr19440 2 114054296 to 114054303 7 + TSS region transcription start site region 19440
Tssr19441 2 114054329 to 114054340 11 + TSS region transcription start site region 19441
Tssr19442 2 114054344 to 114054353 9 + TSS region transcription start site region 19442
Tssr19443 2 114054362 to 114054385 23 + TSS region transcription start site region 19443
Tssr19444 2 114054391 to 114054415 24 + TSS region transcription start site region 19444
C130080G10Rik 2 114054396 to 114061505 7109 + antisense lncRNA gene RIKEN cDNA C130080G10 gene
Tssr19445 2 114054416 to 114054461 45 + TSS region transcription start site region 19445
Tssr19446 2 114054634 to 114054645 11 + TSS region transcription start site region 19446
Tssr19447 2 114054849 to 114054860 11 + TSS region transcription start site region 19447
Tssr19448 2 114055135 to 114055144 9 + TSS region transcription start site region 19448
Tssr19449 2 114055149 to 114055161 12 + TSS region transcription start site region 19449
Tssr19450 2 114055162 to 114055182 20 + TSS region transcription start site region 19450
Tssr19451 2 114055190 to 114055209 19 + TSS region transcription start site region 19451
Tssr19452 2 114055218 to 114055227 9 + TSS region transcription start site region 19452
Tssr603 2 114055256 to 114055266 10 + TSS region transcription start site region 603
Tssr19453 2 114055270 to 114055287 17 + TSS region transcription start site region 19453
Tssr19454 2 114055298 to 114055312 14 + TSS region transcription start site region 19454
Tssr19455 2 114055324 to 114055327 3 + TSS region transcription start site region 19455
Tssr19456 2 114056284 to 114056328 44 + TSS region transcription start site region 19456
Gm46757 2 114058253 to 114060787 2534 - lncRNA gene predicted gene, 46757
Tssr19457 2 114061163 to 114061176 13 + TSS region transcription start site region 19457
Tssr19458 2 114061184 to 114061195 11 + TSS region transcription start site region 19458
Aqr 2 114101161 to 114175339 74178 - protein coding gene aquarius
Tssr19459 2 114103327 to 114103333 6 + TSS region transcription start site region 19459
n-TDgtc2 2 114103367 to 114103438 71 + tRNA gene nuclear encoded tRNA aspartic acid 2 (anticodon GTC)
Tssr25694 2 114146973 to 114146994 21 - TSS region transcription start site region 25694
Tssr25695 2 114147042 to 114147054 12 - TSS region transcription start site region 25695
Tssr25696 2 114147066 to 114147080 14 - TSS region transcription start site region 25696
Tssr25697 2 114147097 to 114147103 6 - TSS region transcription start site region 25697
Tssr25698 2 114150504 to 114150514 10 - TSS region transcription start site region 25698
Mir7002 2 114150516 to 114150570 54 - miRNA gene microRNA 7002
D2Dcr60 2 114152182 to 114152287 105 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 60
Tssr25699 2 114157589 to 114157596 7 - TSS region transcription start site region 25699
Cpgi12055 2 114174929 to 114175417 488 CpG island CpG island 12055
Tssr25700 2 114175274 to 114175293 19 - TSS region transcription start site region 25700
Tssr25701 2 114175299 to 114175317 18 - TSS region transcription start site region 25701
Tssr25702 2 114175321 to 114175344 23 - TSS region transcription start site region 25702
Zfp770 2 114193456 to 114201432 7976 - protein coding gene zinc finger protein 770
Tssr19460 2 114200215 to 114200218 3 + TSS region transcription start site region 19460
Cpgi12056 2 114201085 to 114201657 572 CpG island CpG island 12056
Tssr25703 2 114201416 to 114201445 29 - TSS region transcription start site region 25703
Tssr25704 2 114228676 to 114228681 5 - TSS region transcription start site region 25704
Gm25103 2 114270111 to 114270428 317 + unclassified non-coding RNA gene predicted gene, 25103
Gm29234 2 114272174 to 114273435 1261 - lincRNA gene predicted gene 29234
Lmr28d 2 114292889 to 114293051 162 QTL leishmaniasis resistance 28d
Lmr28c 2 114292889 to 114293051 162 QTL leishmaniasis resistance 28c
Actre14 2 114292889 to 118112609 3819720 QTL activity response to ethanol 14
D2Mit102 2 114292889 to 114293051 162 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 102
Parms1 2 114293051 to 74693773 -39599278 QTL patched associated RMS 1
Tssr19461 2 114294493 to 114294495 2 + TSS region transcription start site region 19461