Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:11375827-11575829

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
8030442B05Rik 2 11338366 to 11398500 60134 - lincRNA gene RIKEN cDNA 8030442B05 gene
4933403L11Rik 2 11383787 to 11384907 1120 - unclassified gene RIKEN cDNA 4933403L11 gene
Gm13291 2 11385003 to 11387064 2061 + lincRNA gene predicted gene 13291
Tssr22611 2 11398495 to 11398517 22 - TSS region transcription start site region 22611
Tssr22612 2 11398525 to 11398538 13 - TSS region transcription start site region 22612
Gm13292 2 11409031 to 11410030 999 - pseudogene predicted gene 13292
Gm13296 2 11420224 to 11421220 996 + pseudogene predicted gene 13296
Gm31990 2 11422527 to 11447447 24920 - lncRNA gene predicted gene, 31990
Tssr22613 2 11425702 to 11425705 3 - TSS region transcription start site region 22613
Pfkfb3 2 11471430 to 11554071 82641 - protein coding gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
Tssr22614 2 11473753 to 11473796 43 - TSS region transcription start site region 22614
Tssr22615 2 11473892 to 11473938 46 - TSS region transcription start site region 22615
Tssr22616 2 11473964 to 11473980 16 - TSS region transcription start site region 22616
Tssr22617 2 11473985 to 11473996 11 - TSS region transcription start site region 22617
Tssr22618 2 11474036 to 11474044 8 - TSS region transcription start site region 22618
Tssr22619 2 11474206 to 11474219 13 - TSS region transcription start site region 22619
Tssr22620 2 11475827 to 11475829 2 - TSS region transcription start site region 22620
Tssr22621 2 11480349 to 11480362 13 - TSS region transcription start site region 22621
Tssr22622 2 11484772 to 11484791 19 - TSS region transcription start site region 22622
Tssr22623 2 11492094 to 11492108 14 - TSS region transcription start site region 22623
Tssr22624 2 11492611 to 11492648 37 - TSS region transcription start site region 22624
Tssr22625 2 11492652 to 11492663 11 - TSS region transcription start site region 22625
Tssr22626 2 11493939 to 11493969 30 - TSS region transcription start site region 22626
Tssr22627 2 11494009 to 11494020 11 - TSS region transcription start site region 22627
Tssr22628 2 11498380 to 11498400 20 - TSS region transcription start site region 22628
Tssr22629 2 11498401 to 11498414 13 - TSS region transcription start site region 22629
Tssr22630 2 11498443 to 11498454 11 - TSS region transcription start site region 22630
Tssr22631 2 11499561 to 11499565 4 - TSS region transcription start site region 22631
Tssr22632 2 11499913 to 11499927 14 - TSS region transcription start site region 22632
Cpgi11200 2 11501067 to 11502634 1567 CpG island CpG island 11200
Tssr22633 2 11501717 to 11501728 11 - TSS region transcription start site region 22633
Tssr22634 2 11502032 to 11502049 17 - TSS region transcription start site region 22634
Tssr22635 2 11502050 to 11502061 11 - TSS region transcription start site region 22635
Tssr22636 2 11502069 to 11502080 11 - TSS region transcription start site region 22636
Tssr22637 2 11502092 to 11502126 34 - TSS region transcription start site region 22637
Cpgi11201 2 11502837 to 11503446 609 CpG island CpG island 11201
Tssr22638 2 11513174 to 11513196 22 - TSS region transcription start site region 22638
Tssr22639 2 11513212 to 11513229 17 - TSS region transcription start site region 22639
Gm10851 2 11521524 to 11529986 8462 + antisense lncRNA gene predicted gene 10851
Tssr16124 2 11521700 to 11521714 14 + TSS region transcription start site region 16124
Tssr407 2 11522026 to 11522048 22 + TSS region transcription start site region 407
Tssr16125 2 11522076 to 11522095 19 + TSS region transcription start site region 16125
D2Mit357 2 11523588 to 11523712 124 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 357
Gm37975 2 11532596 to 11534694 2098 - unclassified gene predicted gene, 37975
Cpgi11202 2 11535333 to 11535874 541 CpG island CpG island 11202
Tssr22640 2 11535519 to 11535557 38 - TSS region transcription start site region 22640
Tssr16126 2 11535710 to 11535721 11 + TSS region transcription start site region 16126
Cpgi11203 2 11553210 to 11554216 1006 CpG island CpG island 11203
Tssr22641 2 11553893 to 11553961 68 - TSS region transcription start site region 22641
Tssr16127 2 11554023 to 11554040 17 + TSS region transcription start site region 16127
Cpgi11204 2 11563375 to 11563534 159 CpG island CpG island 11204