Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:112997052-113437094

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ryr3 2 112631355 to 113217096 585741 - protein coding gene ryanodine receptor 3
D2Dcr59 2 113050276 to 113050371 95 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 59
D2Mit481 2 113172764 to 113172875 111 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 481
Cpgi12049 2 113216439 to 113217658 1219 CpG island CpG island 12049
Tssr25636 2 113217026 to 113217039 13 - TSS region transcription start site region 25636
Tssr25637 2 113217052 to 113217094 42 - TSS region transcription start site region 25637
Tssr19398 2 113285717 to 113285719 2 + TSS region transcription start site region 19398
Tssr19399 2 113285731 to 113285749 18 + TSS region transcription start site region 19399
Tmco5b 2 113285732 to 113297190 11458 + protein coding gene transmembrane and coiled-coil domains 5B
Gm26505 2 113288273 to 113288438 165 + snRNA gene predicted gene, 26505
D2Mit390 2 113326334 to 113326443 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 390
Cpgi12050 2 113327286 to 113328008 722 CpG island CpG island 12050
Tssr19400 2 113327711 to 113327753 42 + TSS region transcription start site region 19400
Fmn1 2 113327736 to 113716767 389031 + protein coding gene formin 1
Tssr19401 2 113327756 to 113327781 25 + TSS region transcription start site region 19401
Tssr25638 2 113348010 to 113348022 12 - TSS region transcription start site region 25638
A930030B21Rik 2 113352587 to 113352911 324 unclassified gene RIKEN cDNA A930030B21 gene
Tssr19402 2 113364545 to 113364570 25 + TSS region transcription start site region 19402
Tssr19403 2 113365494 to 113365506 12 + TSS region transcription start site region 19403
Tssr19404 2 113365527 to 113365539 12 + TSS region transcription start site region 19404
Gm13967 2 113384681 to 113385199 518 + pseudogene predicted gene 13967
Gm13963 2 113387107 to 113441094 53987 - antisense lncRNA gene predicted gene 13963
Gm13965 2 113400459 to 113410250 9791 + unclassified non-coding RNA gene predicted gene 13965
Tssr19405 2 113405103 to 113405112 9 + TSS region transcription start site region 19405
Tssr19406 2 113405114 to 113405127 13 + TSS region transcription start site region 19406
Tssr19407 2 113405131 to 113405157 26 + TSS region transcription start site region 19407
Tssr19408 2 113405174 to 113405192 18 + TSS region transcription start site region 19408
Tssr19409 2 113405197 to 113405201 4 + TSS region transcription start site region 19409
Tssr19410 2 113405216 to 113405225 9 + TSS region transcription start site region 19410