Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:112283969-112474717

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc12a6 2 112266042 to 112363163 97121 + protein coding gene solute carrier family 12, member 6
Tssr19365 2 112284561 to 112284610 49 + TSS region transcription start site region 19365
Mpaps1 2 112284851 to 97198212 -15086639 QTL microphthalmia anophthalmia susceptibility 1
Tssr19366 2 112284980 to 112284982 2 + TSS region transcription start site region 19366
Tssr19367 2 112305748 to 112305754 6 + TSS region transcription start site region 19367
Tssr19368 2 112305982 to 112306009 27 + TSS region transcription start site region 19368
Gm39908 2 112335859 to 112352444 16585 - lncRNA gene predicted gene, 39908
Gm10792 2 112358142 to 112362148 4006 unclassified gene predicted gene 10792
Tssr19369 2 112361688 to 112361713 25 + TSS region transcription start site region 19369
Tssr19370 2 112361744 to 112361752 8 + TSS region transcription start site region 19370
Emc4 2 112363019 to 112368027 5008 - protein coding gene ER membrane protein complex subunit 4
Tssr25628 2 112363327 to 112363333 6 - TSS region transcription start site region 25628
Cpgi12045 2 112367691 to 112368250 559 CpG island CpG island 12045
Tssr25629 2 112367958 to 112368017 59 - TSS region transcription start site region 25629
Tssr25630 2 112368021 to 112368036 15 - TSS region transcription start site region 25630
Tssr19371 2 112368046 to 112368078 32 + TSS region transcription start site region 19371
Tssr19372 2 112368083 to 112368110 27 + TSS region transcription start site region 19372
Gm21985 2 112376850 to 112379055 2205 + protein coding gene predicted gene 21985
Tssr19373 2 112376983 to 112377006 23 + TSS region transcription start site region 19373
Tssr19374 2 112377155 to 112377175 20 + TSS region transcription start site region 19374
Tssr19375 2 112377217 to 112377232 15 + TSS region transcription start site region 19375
Tssr19376 2 112377234 to 112377245 11 + TSS region transcription start site region 19376
Cpgi12046 2 112378969 to 112379717 748 CpG island CpG island 12046
Tssr19377 2 112379204 to 112379253 49 + TSS region transcription start site region 19377
Katnbl1 2 112379211 to 112414237 35026 + protein coding gene katanin p80 subunit B like 1
Tssr19378 2 112379266 to 112379284 18 + TSS region transcription start site region 19378
Tssr19379 2 112379308 to 112379322 14 + TSS region transcription start site region 19379
Tssr19380 2 112383848 to 112383852 4 + TSS region transcription start site region 19380
Gm13940 2 112389197 to 112389497 300 - pseudogene predicted gene 13940
D2Ertd127e 2 112394659 to 112394875 216 DNA segment DNA segment, Chr 2, ERATO Doi 127, expressed
Tssr19381 2 112446913 to 112446923 10 + TSS region transcription start site region 19381
Cpgi12047 2 112454676 to 112455506 830 CpG island CpG island 12047
Tssr25631 2 112454900 to 112454933 33 - TSS region transcription start site region 25631
Emc7 2 112455014 to 112469204 14190 + protein coding gene ER membrane protein complex subunit 7
Tssr19382 2 112455022 to 112455063 41 + TSS region transcription start site region 19382
n-R5s202 2 112469253 to 112469366 113 - rRNA gene nuclear encoded rRNA 5S 202