Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:111921947-112362897

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm13928 2 111926456 to 111927963 1507 + pseudogene predicted gene 13928
Olfr1307 2 111944516 to 111945454 938 - protein coding gene olfactory receptor 1307
Olfr1308 2 111960109 to 111961071 962 - protein coding gene olfactory receptor 1308
Olfr1309 2 111983134 to 111984096 962 - protein coding gene olfactory receptor 1309
Tssr19339 2 112000101 to 112000105 4 + TSS region transcription start site region 19339
Gm13929 2 112000178 to 112001301 1123 + pseudogene predicted gene 13929
Tssr19340 2 112000328 to 112000343 15 + TSS region transcription start site region 19340
Olfr1310 2 112008246 to 112009184 938 - protein coding gene olfactory receptor 1310
Olfr1311 2 112020914 to 112021852 938 - protein coding gene olfactory receptor 1311
Olfr1312 2 112042077 to 112043030 953 - protein coding gene olfactory receptor 1312
Olfr1313 2 112071646 to 112072581 935 - protein coding gene olfactory receptor 1313
Olfr1314 2 112091761 to 112092699 938 - protein coding gene olfactory receptor 1314
Olfr1315-ps1 2 112110312 to 112110815 503 - pseudogene olfactory receptor 1315, pseudogene 1
Olfr1316 2 112129871 to 112130815 944 - protein coding gene olfactory receptor 1316
Olfr1317 2 112141947 to 112142897 950 + protein coding gene olfactory receptor 1317
Olfr1318 2 112155898 to 112157007 1109 + protein coding gene olfactory receptor 1318
Olfr1319-ps1 2 112167725 to 112167982 257 + pseudogene olfactory receptor 1319, pseudogene 1
Actre3 2 112194642 to 128331901 16137259 QTL activity response to ethanol 3
Actre4 2 112194642 to 128331901 16137259 QTL activity response to ethanol 4
D2Mit207 2 112194642 to 112194776 134 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 207
Tssr25624 2 112203040 to 112203071 31 - TSS region transcription start site region 25624
Tssr25625 2 112203365 to 112203373 8 - TSS region transcription start site region 25625
Gm4284 2 112210223 to 112210820 597 - pseudogene predicted gene 4284
Cpgi12042 2 112239072 to 112240727 1655 CpG island CpG island 12042
Tssr19341 2 112239364 to 112239409 45 + TSS region transcription start site region 19341
Tssr19342 2 112239474 to 112239508 34 + TSS region transcription start site region 19342
Tssr19343 2 112239755 to 112239764 9 + TSS region transcription start site region 19343
Tssr19344 2 112239784 to 112239795 11 + TSS region transcription start site region 19344
Tssr19345 2 112239815 to 112239860 45 + TSS region transcription start site region 19345
Lpcat4 2 112239841 to 112247111 7270 + protein coding gene lysophosphatidylcholine acyltransferase 4
Tssr19346 2 112242035 to 112242053 18 + TSS region transcription start site region 19346
Tssr19347 2 112242593 to 112242628 35 + TSS region transcription start site region 19347
Nutm1 2 112247948 to 112259291 11343 - protein coding gene NUT midline carcinoma, family member 1
Tssr25626 2 112259281 to 112259312 31 - TSS region transcription start site region 25626
Cpgi12043 2 112261885 to 112262176 291 CpG island CpG island 12043
Nop10 2 112261926 to 112262898 972 + protein coding gene NOP10 ribonucleoprotein
Tssr19348 2 112261945 to 112261951 6 + TSS region transcription start site region 19348
Tssr19349 2 112261957 to 112261974 17 + TSS region transcription start site region 19349
Tssr19350 2 112262328 to 112262337 9 + TSS region transcription start site region 19350
Cpgi12044 2 112265336 to 112266470 1134 CpG island CpG island 12044
Tssr19351 2 112265549 to 112265557 8 + TSS region transcription start site region 19351
Tssr19352 2 112265558 to 112265647 89 + TSS region transcription start site region 19352
Tssr19353 2 112265708 to 112265719 11 + TSS region transcription start site region 19353
Tssr19354 2 112265734 to 112265760 26 + TSS region transcription start site region 19354
Tssr19355 2 112265783 to 112265794 11 + TSS region transcription start site region 19355
Tssr596 2 112265804 to 112265807 3 + TSS region transcription start site region 596
Tssr19356 2 112265809 to 112265858 49 + TSS region transcription start site region 19356
Tssr19357 2 112265861 to 112265925 64 + TSS region transcription start site region 19357
Slc12a6 2 112266042 to 112363163 97121 + protein coding gene solute carrier family 12, member 6
Tssr19358 2 112266394 to 112266404 10 + TSS region transcription start site region 19358
Tssr19359 2 112266456 to 112266504 48 + TSS region transcription start site region 19359
Tssr19360 2 112266516 to 112266550 34 + TSS region transcription start site region 19360
Tssr19361 2 112266811 to 112266862 51 + TSS region transcription start site region 19361
Tssr25627 2 112268003 to 112268017 14 - TSS region transcription start site region 25627
E330013P08Rik 2 112268980 to 112272587 3607 unclassified non-coding RNA gene RIKEN cDNA E330013P08 gene
Tssr19362 2 112270817 to 112270821 4 + TSS region transcription start site region 19362
D2Dcr58 2 112273456 to 112273555 99 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 58
Tssr19363 2 112281624 to 112281628 4 + TSS region transcription start site region 19363
Tssr19364 2 112283191 to 112283195 4 + TSS region transcription start site region 19364
Tssr19365 2 112284561 to 112284610 49 + TSS region transcription start site region 19365
Mpaps1 2 112284851 to 97198212 -15086639 QTL microphthalmia anophthalmia susceptibility 1
Tssr19366 2 112284980 to 112284982 2 + TSS region transcription start site region 19366
Tssr19367 2 112305748 to 112305754 6 + TSS region transcription start site region 19367
Tssr19368 2 112305982 to 112306009 27 + TSS region transcription start site region 19368
Gm39908 2 112335859 to 112352444 16585 - lncRNA gene predicted gene, 39908
Gm10792 2 112358142 to 112362148 4006 unclassified gene predicted gene 10792
Tssr19369 2 112361688 to 112361713 25 + TSS region transcription start site region 19369
Tssr19370 2 112361744 to 112361752 8 + TSS region transcription start site region 19370