Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:11162108-11311222

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr22604 2 11170067 to 11170087 20 - TSS region transcription start site region 22604
Tssr16098 2 11171881 to 11171915 34 + TSS region transcription start site region 16098
Cpgi11198 2 11172012 to 11172667 655 CpG island CpG island 11198
Tssr16099 2 11172033 to 11172053 20 + TSS region transcription start site region 16099
Tssr16100 2 11172054 to 11172072 18 + TSS region transcription start site region 16100
Tssr16101 2 11172080 to 11172140 60 + TSS region transcription start site region 16101
Prkcq 2 11172108 to 11301222 129114 + protein coding gene protein kinase C, theta
Tssr402 2 11172140 to 11172145 5 + TSS region transcription start site region 402
Tssr16102 2 11172161 to 11172172 11 + TSS region transcription start site region 16102
Tssr16103 2 11172182 to 11172199 17 + TSS region transcription start site region 16103
Tssr16104 2 11172216 to 11172237 21 + TSS region transcription start site region 16104
Tssr16105 2 11172288 to 11172302 14 + TSS region transcription start site region 16105
Tssr16106 2 11172309 to 11172327 18 + TSS region transcription start site region 16106
Tssr16107 2 11172329 to 11172350 21 + TSS region transcription start site region 16107
Tssr16108 2 11172356 to 11172367 11 + TSS region transcription start site region 16108
Tssr403 2 11172382 to 11172385 3 + TSS region transcription start site region 403
Tssr16109 2 11172388 to 11172419 31 + TSS region transcription start site region 16109
Tssr16110 2 11175863 to 11175873 10 + TSS region transcription start site region 16110
Gm36932 2 11181012 to 11181940 928 + unclassified gene predicted gene, 36932
Gm37520 2 11190641 to 11193312 2671 - unclassified gene predicted gene, 37520
Tssr16111 2 11206025 to 11206035 10 + TSS region transcription start site region 16111
Tssr16112 2 11206109 to 11206112 3 + TSS region transcription start site region 16112
Tssr22605 2 11212008 to 11212025 17 - TSS region transcription start site region 22605
Tssr16113 2 11218449 to 11218462 13 + TSS region transcription start site region 16113
Tssr16114 2 11218493 to 11218504 11 + TSS region transcription start site region 16114
Gm37766 2 11227297 to 11229863 2566 + unclassified gene predicted gene, 37766
Tssr16115 2 11250442 to 11250449 7 + TSS region transcription start site region 16115
Tssr16116 2 11250462 to 11250474 12 + TSS region transcription start site region 16116
Tssr16117 2 11250475 to 11250485 10 + TSS region transcription start site region 16117
Tssr16118 2 11250487 to 11250498 11 + TSS region transcription start site region 16118
Tssr22606 2 11259515 to 11259521 6 - TSS region transcription start site region 22606
Cpgi11199 2 11290137 to 11290698 561 CpG island CpG island 11199