Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:10761232-11241378

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr16096 2 10803064 to 10803083 19 + TSS region transcription start site region 16096
Gm31729 2 10825745 to 10828322 2577 + lncRNA gene predicted gene, 31729
Tssr16097 2 10893275 to 10893283 8 + TSS region transcription start site region 16097
Gm18547 2 10893711 to 10894520 809 + pseudogene predicted gene, 18547
Gm13265 2 10898671 to 10899091 420 - pseudogene predicted gene 13265
Gm13263 2 10959127 to 10959964 837 - pseudogene predicted gene 13263
D2Mit201 2 11001232 to 11001378 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 201
Gm37343 2 11013808 to 11013918 110 - unclassified gene predicted gene, 37343
Gm23877 2 11014762 to 11014890 128 - snoRNA gene predicted gene, 23877
Gm13264 2 11036874 to 11060129 23255 + lincRNA gene predicted gene 13264
Gm26478 2 11087781 to 11087913 132 - snRNA gene predicted gene, 26478
Gm13297 2 11090844 to 11091763 919 + pseudogene predicted gene 13297
Gm13294 2 11098933 to 11100262 1329 - pseudogene predicted gene 13294
Cpgi11197 2 11099216 to 11099494 278 CpG island CpG island 11197
Tssr22602 2 11159773 to 11159779 6 - TSS region transcription start site region 22602
Tssr22603 2 11160791 to 11160807 16 - TSS region transcription start site region 22603
Tssr22604 2 11170067 to 11170087 20 - TSS region transcription start site region 22604
Tssr16098 2 11171881 to 11171915 34 + TSS region transcription start site region 16098
Cpgi11198 2 11172012 to 11172667 655 CpG island CpG island 11198
Tssr16099 2 11172033 to 11172053 20 + TSS region transcription start site region 16099
Tssr16100 2 11172054 to 11172072 18 + TSS region transcription start site region 16100
Tssr16101 2 11172080 to 11172140 60 + TSS region transcription start site region 16101
Prkcq 2 11172108 to 11301222 129114 + protein coding gene protein kinase C, theta
Tssr402 2 11172140 to 11172145 5 + TSS region transcription start site region 402
Tssr16102 2 11172161 to 11172172 11 + TSS region transcription start site region 16102
Tssr16103 2 11172182 to 11172199 17 + TSS region transcription start site region 16103
Tssr16104 2 11172216 to 11172237 21 + TSS region transcription start site region 16104
Tssr16105 2 11172288 to 11172302 14 + TSS region transcription start site region 16105
Tssr16106 2 11172309 to 11172327 18 + TSS region transcription start site region 16106
Tssr16107 2 11172329 to 11172350 21 + TSS region transcription start site region 16107
Tssr16108 2 11172356 to 11172367 11 + TSS region transcription start site region 16108
Tssr403 2 11172382 to 11172385 3 + TSS region transcription start site region 403
Tssr16109 2 11172388 to 11172419 31 + TSS region transcription start site region 16109
Tssr16110 2 11175863 to 11175873 10 + TSS region transcription start site region 16110
Gm36932 2 11181012 to 11181940 928 + unclassified gene predicted gene, 36932
Gm37520 2 11190641 to 11193312 2671 - unclassified gene predicted gene, 37520
Tssr16111 2 11206025 to 11206035 10 + TSS region transcription start site region 16111
Tssr16112 2 11206109 to 11206112 3 + TSS region transcription start site region 16112
Tssr22605 2 11212008 to 11212025 17 - TSS region transcription start site region 22605
Tssr16113 2 11218449 to 11218462 13 + TSS region transcription start site region 16113
Tssr16114 2 11218493 to 11218504 11 + TSS region transcription start site region 16114
Gm37766 2 11227297 to 11229863 2566 + unclassified gene predicted gene, 37766