Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:105772710-106992711

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elp4 2 105701027 to 105904564 203537 - protein coding gene elongator acetyltransferase complex subunit 4
Tssr25566 2 105787547 to 105787550 3 - TSS region transcription start site region 25566
Cpgi12023 2 105904308 to 105904882 574 CpG island CpG island 12023
Tssr25567 2 105904484 to 105904527 43 - TSS region transcription start site region 25567
Tssr19271 2 105904629 to 105904685 56 + TSS region transcription start site region 19271
Immp1l 2 105904638 to 105965558 60920 + protein coding gene IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
Gm4415 2 105946096 to 105950989 4893 protein coding gene predicted gene 4415
Tssr25568 2 105959565 to 105959568 3 - TSS region transcription start site region 25568
Dnajc24 2 105966709 to 106003549 36840 - protein coding gene DnaJ heat shock protein family (Hsp40) member C24
Gm22002 2 105992757 to 105992881 124 + miRNA gene predicted gene, 22002
n-R5s201 2 105997032 to 105997147 115 + rRNA gene nuclear encoded rRNA 5S 201
Cpgi12024 2 106002948 to 106003514 566 CpG island CpG island 12024
Tssr25569 2 106003181 to 106003277 96 - TSS region transcription start site region 25569
Tssr19272 2 106003327 to 106003340 13 + TSS region transcription start site region 19272
Tssr19273 2 106003353 to 106003386 33 + TSS region transcription start site region 19273
Gm13992 2 106015200 to 106015355 155 + pseudogene predicted gene 13992
D2Dcr55 2 106019122 to 106019223 101 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 55
Gm9342 2 106038218 to 106053528 15310 + pseudogene predicted gene 9342
Gm29053 2 106038463 to 106040496 2033 - lincRNA gene predicted gene 29053
Dcdc5 2 106080864 to 106408603 327739 + protein coding gene doublecortin domain containing 5
Tssr19274 2 106080925 to 106080930 5 + TSS region transcription start site region 19274
Tssr19275 2 106080993 to 106081004 11 + TSS region transcription start site region 19275
Tssr19276 2 106081027 to 106081035 8 + TSS region transcription start site region 19276
Cpgi12025 2 106183708 to 106183953 245 CpG island CpG island 12025
Tssr19277 2 106226449 to 106226458 9 + TSS region transcription start site region 19277
Gm14013 2 106265307 to 106265576 269 + pseudogene predicted gene 14013
Tssr19278 2 106304737 to 106304754 17 + TSS region transcription start site region 19278
D2Mit128 2 106320954 to 106321192 238 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 128
Gm46755 2 106372381 to 106430296 57915 - lncRNA gene predicted gene, 46755
Tssr19279 2 106382710 to 106382711 1 + TSS region transcription start site region 19279
Gm36036 2 106410026 to 106429092 19066 + lncRNA gene predicted gene, 36036
D2Mit13 2 106420336 to 106420525 189 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 13
D2Mit214 2 106420343 to 106420525 182 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 214
Gm14015 2 106463823 to 106523103 59280 - lincRNA gene predicted gene 14015
D2Mit100 2 106537368 to 106537479 111 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 100
Gm36544 2 106547309 to 106566843 19534 + lncRNA gene predicted gene, 36544
Gm14014 2 106574791 to 106580840 6049 - lincRNA gene predicted gene 14014
BB218582 2 106642917 to 106650364 7447 - lncRNA gene expressed sequence BB218582
Tssr25570 2 106650321 to 106650338 17 - TSS region transcription start site region 25570
Tssr25571 2 106650352 to 106650374 22 - TSS region transcription start site region 25571
Cpgi12026 2 106692964 to 106694702 1738 CpG island CpG island 12026
Tssr19280 2 106693122 to 106693139 17 + TSS region transcription start site region 19280
Tssr19281 2 106693165 to 106693174 9 + TSS region transcription start site region 19281
Tssr19282 2 106693185 to 106693278 93 + TSS region transcription start site region 19282
Tssr19283 2 106693408 to 106693425 17 + TSS region transcription start site region 19283
Tssr19284 2 106693445 to 106693499 54 + TSS region transcription start site region 19284
Mpped2 2 106693459 to 106868360 174901 + protein coding gene metallophosphoesterase domain containing 2
Tssr19285 2 106693502 to 106693520 18 + TSS region transcription start site region 19285
Tssr19286 2 106693526 to 106693575 49 + TSS region transcription start site region 19286
Tssr19287 2 106693577 to 106693602 25 + TSS region transcription start site region 19287
Cpgi12027 2 106694927 to 106695952 1025 CpG island CpG island 12027
Tssr19288 2 106695594 to 106695608 14 + TSS region transcription start site region 19288
C030026O17Rik 2 106732991 to 106733956 965 unclassified gene RIKEN cDNA C030026O17 gene
Gm29885 2 106733556 to 106739751 6195 - lncRNA gene predicted gene, 29885
Gm22813 2 106809336 to 106809458 122 + snoRNA gene predicted gene, 22813
C130023O10Rik 2 106818050 to 106831346 13296 + unclassified gene RIKEN cDNA C130023O10 gene
D2Dcr56 2 106909932 to 106910056 124 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 56
D2Mit206 2 106909939 to 106910082 143 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 206
Gm13901 2 106916771 to 106917238 467 + pseudogene predicted gene 13901
Gm13902 2 106926568 to 106927169 601 - pseudogene predicted gene 13902
Gm39902 2 106955781 to 106958634 2853 + lncRNA gene predicted gene, 39902
Arl14ep 2 106962527 to 106974424 11897 - protein coding gene ADP-ribosylation factor-like 14 effector protein
Tssr25572 2 106964302 to 106964305 3 - TSS region transcription start site region 25572
Tssr25573 2 106970367 to 106970374 7 - TSS region transcription start site region 25573
Tssr25574 2 106970393 to 106970407 14 - TSS region transcription start site region 25574
Cpgi12028 2 106974078 to 106974566 488 CpG island CpG island 12028
Tssr25575 2 106974332 to 106974360 28 - TSS region transcription start site region 25575
Tssr25576 2 106974361 to 106974381 20 - TSS region transcription start site region 25576
Tssr25577 2 106974383 to 106974422 39 - TSS region transcription start site region 25577
Tssr25578 2 106974433 to 106974465 32 - TSS region transcription start site region 25578
Tssr19289 2 106987216 to 106987217 1 + TSS region transcription start site region 19289