Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:105689308-106119882

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pax6 2 105668900 to 105697364 28464 + protein coding gene paired box 6
Tssr19269 2 105689578 to 105689587 9 + TSS region transcription start site region 19269
Tssr19270 2 105691588 to 105691596 8 + TSS region transcription start site region 19270
Elp4 2 105701027 to 105904564 203537 - protein coding gene elongator acetyltransferase complex subunit 4
Gm13954 2 105708999 to 105710098 1099 + antisense lncRNA gene predicted gene 13954
A130004G07Rik 2 105736548 to 105741861 5313 unclassified non-coding RNA gene RIKEN cDNA A130004G07 gene
Tssr25566 2 105787547 to 105787550 3 - TSS region transcription start site region 25566
Cpgi12023 2 105904308 to 105904882 574 CpG island CpG island 12023
Tssr25567 2 105904484 to 105904527 43 - TSS region transcription start site region 25567
Tssr19271 2 105904629 to 105904685 56 + TSS region transcription start site region 19271
Immp1l 2 105904638 to 105965558 60920 + protein coding gene IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
Gm4415 2 105946096 to 105950989 4893 protein coding gene predicted gene 4415
Tssr25568 2 105959565 to 105959568 3 - TSS region transcription start site region 25568
Dnajc24 2 105966709 to 106003549 36840 - protein coding gene DnaJ heat shock protein family (Hsp40) member C24
Gm22002 2 105992757 to 105992881 124 + miRNA gene predicted gene, 22002
n-R5s201 2 105997032 to 105997147 115 + rRNA gene nuclear encoded rRNA 5S 201
Cpgi12024 2 106002948 to 106003514 566 CpG island CpG island 12024
Tssr25569 2 106003181 to 106003277 96 - TSS region transcription start site region 25569
Tssr19272 2 106003327 to 106003340 13 + TSS region transcription start site region 19272
Tssr19273 2 106003353 to 106003386 33 + TSS region transcription start site region 19273
Gm13992 2 106015200 to 106015355 155 + pseudogene predicted gene 13992
D2Dcr55 2 106019122 to 106019223 101 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 55
Gm9342 2 106038218 to 106053528 15310 + pseudogene predicted gene 9342
Gm29053 2 106038463 to 106040496 2033 - lincRNA gene predicted gene 29053
Dcdc5 2 106080864 to 106408603 327739 + protein coding gene doublecortin domain containing 5
Tssr19274 2 106080925 to 106080930 5 + TSS region transcription start site region 19274
Tssr19275 2 106080993 to 106081004 11 + TSS region transcription start site region 19275
Tssr19276 2 106081027 to 106081035 8 + TSS region transcription start site region 19276