Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:105429201-105679845

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm39900 2 105429368 to 105441465 12097 + lncRNA gene predicted gene, 39900
4930527A07Rik 2 105476501 to 105477357 856 + lincRNA gene RIKEN cDNA 4930527A07 gene
D2Mit185 2 105495630 to 105495777 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 185
D2Dcr54 2 105495637 to 105495773 136 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 54
Pax6os1 2 105536080 to 105670330 134250 - antisense lncRNA gene paired box 6 opposite strand 1
Gm13890 2 105537093 to 105537482 389 - pseudogene predicted gene 13890
Rpl10-ps1 2 105554201 to 105554845 644 - pseudogene ribosomal protein L10, pseudogene 1
Gm35946 2 105611282 to 105620482 9200 + lncRNA gene predicted gene, 35946
Paupar 2 105657862 to 105661343 3481 - lincRNA gene Pax6 upstream antisense RNA
Cpgi12014 2 105659961 to 105660323 362 CpG island CpG island 12014
Tssr19248 2 105660773 to 105660785 12 + TSS region transcription start site region 19248
Tssr19249 2 105660800 to 105660812 12 + TSS region transcription start site region 19249
Cpgi12015 2 105667169 to 105667340 171 CpG island CpG island 12015
Cpgi12016 2 105667664 to 105667973 309 CpG island CpG island 12016
Cpgi12017 2 105668646 to 105669143 497 CpG island CpG island 12017
Tssr19250 2 105668888 to 105668914 26 + TSS region transcription start site region 19250
Pax6 2 105668900 to 105697364 28464 + protein coding gene paired box 6
Tssr19251 2 105668943 to 105668950 7 + TSS region transcription start site region 19251
Cpgi12018 2 105669373 to 105670321 948 CpG island CpG island 12018
Tssr25562 2 105670291 to 105670298 7 - TSS region transcription start site region 25562
Tssr25563 2 105670301 to 105670322 21 - TSS region transcription start site region 25563
Cpgi12019 2 105672394 to 105672591 197 CpG island CpG island 12019
Tssr25564 2 105673978 to 105673981 3 - TSS region transcription start site region 25564
Tssr19252 2 105674406 to 105674422 16 + TSS region transcription start site region 19252
Tssr19253 2 105674426 to 105674437 11 + TSS region transcription start site region 19253
Tssr19254 2 105674543 to 105674558 15 + TSS region transcription start site region 19254
Cpgi12020 2 105674597 to 105676885 2288 CpG island CpG island 12020
Tssr25565 2 105675281 to 105675300 19 - TSS region transcription start site region 25565
Tssr19255 2 105675429 to 105675449 20 + TSS region transcription start site region 19255
Tssr19256 2 105675478 to 105675504 26 + TSS region transcription start site region 19256
Tssr19257 2 105675615 to 105675623 8 + TSS region transcription start site region 19257
Tssr19258 2 105675636 to 105675651 15 + TSS region transcription start site region 19258
Tssr19259 2 105675669 to 105675680 11 + TSS region transcription start site region 19259
Tssr19260 2 105675686 to 105675695 9 + TSS region transcription start site region 19260
Tssr19261 2 105675706 to 105675716 10 + TSS region transcription start site region 19261