Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:105402093-105672482

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr19245 2 105425960 to 105425963 3 + TSS region transcription start site region 19245
Tssr19246 2 105425978 to 105425983 5 + TSS region transcription start site region 19246
Tssr19247 2 105425993 to 105425999 6 + TSS region transcription start site region 19247
Gm39900 2 105429368 to 105441465 12097 + lncRNA gene predicted gene, 39900
4930527A07Rik 2 105476501 to 105477357 856 + lincRNA gene RIKEN cDNA 4930527A07 gene
D2Mit185 2 105495630 to 105495777 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 185
D2Dcr54 2 105495637 to 105495773 136 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 54
Pax6os1 2 105536080 to 105670330 134250 - antisense lncRNA gene paired box 6 opposite strand 1
Gm13890 2 105537093 to 105537482 389 - pseudogene predicted gene 13890
Rpl10-ps1 2 105554201 to 105554845 644 - pseudogene ribosomal protein L10, pseudogene 1
Gm35946 2 105611282 to 105620482 9200 + lncRNA gene predicted gene, 35946
Paupar 2 105657862 to 105661343 3481 - lincRNA gene Pax6 upstream antisense RNA
Cpgi12014 2 105659961 to 105660323 362 CpG island CpG island 12014
Tssr19248 2 105660773 to 105660785 12 + TSS region transcription start site region 19248
Tssr19249 2 105660800 to 105660812 12 + TSS region transcription start site region 19249
Cpgi12015 2 105667169 to 105667340 171 CpG island CpG island 12015
Cpgi12016 2 105667664 to 105667973 309 CpG island CpG island 12016
Cpgi12017 2 105668646 to 105669143 497 CpG island CpG island 12017
Tssr19250 2 105668888 to 105668914 26 + TSS region transcription start site region 19250
Pax6 2 105668900 to 105697364 28464 + protein coding gene paired box 6
Tssr19251 2 105668943 to 105668950 7 + TSS region transcription start site region 19251
Cpgi12018 2 105669373 to 105670321 948 CpG island CpG island 12018
Tssr25562 2 105670291 to 105670298 7 - TSS region transcription start site region 25562
Tssr25563 2 105670301 to 105670322 21 - TSS region transcription start site region 25563
Cpgi12019 2 105672394 to 105672591 197 CpG island CpG island 12019