Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 2:104704795-104866760

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33 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tcp11l1 2 104667242 to 104712169 44927 - protein coding gene t-complex 11 like 1
Gm6306 2 104710307 to 104712903 2596 + protein coding gene predicted gene 6306
Cpgi12001 2 104711583 to 104712606 1023 CpG island CpG island 12001
Tssr25532 2 104712122 to 104712180 58 - TSS region transcription start site region 25532
Tssr25533 2 104712639 to 104712650 11 - TSS region transcription start site region 25533
Pin1rt1 2 104713926 to 104716379 2453 - protein coding gene protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1
Depdc7 2 104721784 to 104742857 21073 - protein coding gene DEP domain containing 7
Cpgi12002 2 104742318 to 104743127 809 CpG island CpG island 12002
Tssr25534 2 104742802 to 104742820 18 - TSS region transcription start site region 25534
Tssr25535 2 104742834 to 104742848 14 - TSS region transcription start site region 25535
Qser1 2 104754795 to 104816760 61965 - protein coding gene glutamine and serine rich 1
Tssr25536 2 104780582 to 104780586 4 - TSS region transcription start site region 25536
Tssr25537 2 104785744 to 104785746 2 - TSS region transcription start site region 25537
Cpgi12003 2 104815966 to 104817332 1366 CpG island CpG island 12003
Tssr25538 2 104816742 to 104816792 50 - TSS region transcription start site region 25538
Tssr19221 2 104816870 to 104816925 55 + TSS region transcription start site region 19221
2310047K21Rik 2 104816922 to 104830673 13751 + lncRNA gene RIKEN cDNA 2310047K21 gene
Tssr25539 2 104816941 to 104816955 14 - TSS region transcription start site region 25539
Tssr25540 2 104816969 to 104817009 40 - TSS region transcription start site region 25540
Tssr19222 2 104817032 to 104817071 39 + TSS region transcription start site region 19222
Gm39898 2 104818831 to 104819206 375 + lncRNA gene predicted gene, 39898
Gm13886 2 104820083 to 104820972 889 + pseudogene predicted gene 13886
Tssr19223 2 104820799 to 104820823 24 + TSS region transcription start site region 19223
Tssr19224 2 104821346 to 104821393 47 + TSS region transcription start site region 19224
Prrg4 2 104830741 to 104849872 19131 - protein coding gene proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
Cpgi12004 2 104849034 to 104849981 947 CpG island CpG island 12004
Tssr25541 2 104849465 to 104849483 18 - TSS region transcription start site region 25541
Tssr25542 2 104849495 to 104849502 7 - TSS region transcription start site region 25542
Tssr25543 2 104849662 to 104849714 52 - TSS region transcription start site region 25543
Tssr25544 2 104849728 to 104849745 17 - TSS region transcription start site region 25544
Tssr25545 2 104849756 to 104849800 44 - TSS region transcription start site region 25545
Tssr25546 2 104849941 to 104849950 9 - TSS region transcription start site region 25546
Tssr25547 2 104850042 to 104850089 47 - TSS region transcription start site region 25547