Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Cpgi11996 | 2 | 312 | CpG island | CpG island 11996 | ||
Gm13884 | 2 | 828 | + | pseudogene | predicted gene 13884 | |
Tssr19216 | 2 | 10 | + | TSS region | transcription start site region 19216 | |
Platr14 | 2 | 12245 | + | lncRNA gene | pluripotency associated transcript 14 | |
Cpgi11997 | 2 | 192 | CpG island | CpG island 11997 | ||
Gm22439 | 2 | 131 | + | snoRNA gene | predicted gene, 22439 | |
Gm13885 | 2 | 186 | - | pseudogene | predicted gene 13885 | |
Tssr19217 | 2 | 3 | + | TSS region | transcription start site region 19217 | |
Cpgi11998 | 2 | 998 | CpG island | CpG island 11998 | ||
Tssr19218 | 2 | 80 | + | TSS region | transcription start site region 19218 | |
Cstf3 | 2 | 74906 | + | protein coding gene | cleavage stimulation factor, 3' pre-RNA, subunit 3 | |
Tssr19219 | 2 | 14 | + | TSS region | transcription start site region 19219 | |
Tssr19220 | 2 | 3 | + | TSS region | transcription start site region 19220 | |
D2Mit333 | 2 | 106 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 333 | ||
Bits1 | 2 | 135 | QTL | bitterness sensitivity 1 | ||
D2Mit42 | 2 | 135 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 42 | ||
Gm39897 | 2 | 19639 | + | lncRNA gene | predicted gene, 39897 | |
9330195I24Rik | 2 | 6156 | unclassified gene | RIKEN cDNA 9330195I24 gene | ||
Tssr25531 | 2 | 9 | - | TSS region | transcription start site region 25531 | |
Tcp11l1 | 2 | 34405 | - | protein coding gene | t-complex 11 like 1 | |
Cpgi11999 | 2 | 169 | CpG island | CpG island 11999 | ||
Cpgi12000 | 2 | 161 | CpG island | CpG island 12000 | ||
Gm6306 | 2 | 2510 | + | protein coding gene | predicted gene 6306 | |
Cpgi12001 | 2 | 1023 | CpG island | CpG island 12001 | ||
Tssr25532 | 2 | 58 | - | TSS region | transcription start site region 25532 | |
Tssr25533 | 2 | 11 | - | TSS region | transcription start site region 25533 | |
Pin1rt1 | 2 | 2453 | - | protein coding gene | protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1 | |
Depdc7 | 2 | 21017 | - | protein coding gene | DEP domain containing 7 | |
Cpgi12002 | 2 | 809 | CpG island | CpG island 12002 | ||
Tssr25534 | 2 | 18 | - | TSS region | transcription start site region 25534 | |
Tssr25535 | 2 | 14 | - | TSS region | transcription start site region 25535 | |
Qser1 | 2 | 61965 | - | protein coding gene | glutamine and serine rich 1 | |
Tssr25536 | 2 | 4 | - | TSS region | transcription start site region 25536 | |
Tssr25537 | 2 | 2 | - | TSS region | transcription start site region 25537 | |
Cpgi12003 | 2 | 1366 | CpG island | CpG island 12003 | ||
2310047K21Rik | 2 | 2600 | unclassified gene | RIKEN cDNA 2310047K21 gene | ||
Tssr25538 | 2 | 50 | - | TSS region | transcription start site region 25538 | |
Tssr19221 | 2 | 55 | + | TSS region | transcription start site region 19221 | |
Tssr25539 | 2 | 14 | - | TSS region | transcription start site region 25539 | |
Tssr25540 | 2 | 40 | - | TSS region | transcription start site region 25540 | |
Tssr19222 | 2 | 39 | + | TSS region | transcription start site region 19222 | |
Gm39898 | 2 | 375 | + | lncRNA gene | predicted gene, 39898 | |
Gm13886 | 2 | 792 | + | pseudogene | predicted gene 13886 | |
Tssr19223 | 2 | 24 | + | TSS region | transcription start site region 19223 | |
Tssr19224 | 2 | 47 | + | TSS region | transcription start site region 19224 | |
Prrg4 | 2 | 19109 | - | protein coding gene | proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane) | |
Cpgi12004 | 2 | 947 | CpG island | CpG island 12004 | ||
Tssr25541 | 2 | 18 | - | TSS region | transcription start site region 25541 | |
Tssr25542 | 2 | 7 | - | TSS region | transcription start site region 25542 | |
Tssr25543 | 2 | 52 | - | TSS region | transcription start site region 25543 | |
Tssr25544 | 2 | 17 | - | TSS region | transcription start site region 25544 | |
Tssr25545 | 2 | 44 | - | TSS region | transcription start site region 25545 | |
Tssr25546 | 2 | 9 | - | TSS region | transcription start site region 25546 | |
Tssr25547 | 2 | 47 | - | TSS region | transcription start site region 25547 | |
Gm13887 | 2 | 343 | + | pseudogene | predicted gene 13887 | |
Cpgi12005 | 2 | 297 | CpG island | CpG island 12005 | ||
Tssr19225 | 2 | 26 | + | TSS region | transcription start site region 19225 | |
Ccdc73 | 2 | 113413 | + | protein coding gene | coiled-coil domain containing 73 | |
Tssr587 | 2 | 5 | + | TSS region | transcription start site region 587 | |
Gm10796 | 2 | 3719 | unclassified gene | predicted gene 10796 | ||
Eif3m | 2 | 17371 | - | protein coding gene | eukaryotic translation initiation factor 3, subunit M | |
Cpgi12006 | 2 | 923 | CpG island | CpG island 12006 | ||
Tssr25548 | 2 | 60 | - | TSS region | transcription start site region 25548 | |
Tssr19226 | 2 | 39 | + | TSS region | transcription start site region 19226 | |
Gm38521 | 2 | 788 | + | lncRNA gene | predicted gene, 38521 | |
Gm13888 | 2 | 310 | - | pseudogene | predicted gene 13888 | |
D2Dcr53 | 2 | 104 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 53 | ||
Wt1os | 2 | 49972 | - | antisense lncRNA gene | Wilms tumor 1 homolog, opposite strand | |
Gm11060 | 2 | 1742 | + | protein coding gene | predicted gene 11060 | |
Gm27715 | 2 | 259 | - | unclassified non-coding RNA gene | predicted gene, 27715 | |
Gm27538 | 2 | 293 | - | unclassified non-coding RNA gene | predicted gene, 27538 | |
Cpgi12007 | 2 | 402 | CpG island | CpG island 12007 | ||
Gm27636 | 2 | 121 | - | unclassified non-coding RNA gene | predicted gene, 27636 | |
Gm27308 | 2 | 232 | - | unclassified non-coding RNA gene | predicted gene, 27308 | |
Tssr19227 | 2 | 19 | + | TSS region | transcription start site region 19227 | |
Cpgi12008 | 2 | 1953 | CpG island | CpG island 12008 | ||
Tssr19228 | 2 | 14 | + | TSS region | transcription start site region 19228 | |
Tssr25549 | 2 | 28 | - | TSS region | transcription start site region 25549 | |
Tssr25550 | 2 | 41 | - | TSS region | transcription start site region 25550 | |
Tssr19229 | 2 | 5 | + | TSS region | transcription start site region 19229 | |
Tssr25551 | 2 | 13 | - | TSS region | transcription start site region 25551 | |
Tssr19230 | 2 | 11 | + | TSS region | transcription start site region 19230 | |
Tssr25552 | 2 | 17 | - | TSS region | transcription start site region 25552 | |
Wt1 | 2 | 47085 | + | protein coding gene | Wilms tumor 1 homolog | |
Tssr25553 | 2 | 14 | - | TSS region | transcription start site region 25553 | |
Tssr19231 | 2 | 20 | + | TSS region | transcription start site region 19231 | |
Tssr19232 | 2 | 33 | + | TSS region | transcription start site region 19232 | |
Tssr19233 | 2 | 11 | + | TSS region | transcription start site region 19233 | |
Tssr19234 | 2 | 33 | + | TSS region | transcription start site region 19234 | |
Tssr19235 | 2 | 7 | + | TSS region | transcription start site region 19235 | |
Tssr19236 | 2 | 22 | + | TSS region | transcription start site region 19236 | |
Cpgi12009 | 2 | 400 | CpG island | CpG island 12009 | ||
Tssr19237 | 2 | 17 | + | TSS region | transcription start site region 19237 | |
Cpgi12010 | 2 | 723 | CpG island | CpG island 12010 | ||
Cpgi12011 | 2 | 232 | CpG island | CpG island 12011 | ||
Tssr19238 | 2 | 6 | + | TSS region | transcription start site region 19238 | |
4930415N12Rik | 2 | 775 | unclassified gene | RIKEN cDNA 4930415N12 gene | ||
Tssr19239 | 2 | 9 | + | TSS region | transcription start site region 19239 | |
Tssr19240 | 2 | 17 | + | TSS region | transcription start site region 19240 | |
Tssr19241 | 2 | 3 | + | TSS region | transcription start site region 19241 | |
D2Mit99 | 2 | 167 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 99 | ||
Sluc31a | 2 | 167 | QTL | susceptibility to lung cancer 31a | ||
Cpgi12012 | 2 | 476 | CpG island | CpG island 12012 | ||
Tssr19242 | 2 | 21 | + | TSS region | transcription start site region 19242 | |
Tssr19243 | 2 | 43 | + | TSS region | transcription start site region 19243 | |
Them7 | 2 | 155476 | + | protein coding gene | thioesterase superfamily member 7 | |
D2Mit387 | 2 | 125 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 387 | ||
D2Mit44 | 2 | 147 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 44 | ||
Femwf4 | 2 | 147 | QTL | femur work to failure 4 | ||
Hbnr5 | 2 | -73988670 | QTL | Heligmosomoides bakeri nematode resistance 5 | ||
D2Mit442 | 2 | 126 | DNA segment | DNA Segment, Chr 2, Massachusetts Institute of Technology 442 | ||
Tssr19244 | 2 | 37 | + | TSS region | transcription start site region 19244 | |
Rcn1 | 2 | 13028 | - | protein coding gene | reticulocalbin 1 | |
Cpgi12013 | 2 | 1075 | CpG island | CpG island 12013 | ||
Tssr25554 | 2 | 35 | - | TSS region | transcription start site region 25554 | |
Tssr25555 | 2 | 26 | - | TSS region | transcription start site region 25555 | |
Tssr25556 | 2 | 14 | - | TSS region | transcription start site region 25556 | |
Tssr25557 | 2 | 7 | - | TSS region | transcription start site region 25557 | |
Tssr25558 | 2 | 3 | - | TSS region | transcription start site region 25558 | |
Tssr25559 | 2 | 7 | - | TSS region | transcription start site region 25559 | |
Tssr25560 | 2 | 31 | - | TSS region | transcription start site region 25560 | |
Tssr25561 | 2 | 48 | - | TSS region | transcription start site region 25561 | |
Tssr19245 | 2 | 3 | + | TSS region | transcription start site region 19245 | |
Tssr19246 | 2 | 5 | + | TSS region | transcription start site region 19246 | |
Tssr19247 | 2 | 6 | + | TSS region | transcription start site region 19247 | |
Gm39900 | 2 | 12097 | + | lncRNA gene | predicted gene, 39900 | |
4930527A07Rik | 2 | 856 | + | lincRNA gene | RIKEN cDNA 4930527A07 gene | |
D2Mit185 | 2 | 147 | DNA segment | DNA segment, Chr 2, Massachusetts Institute of Technology 185 | ||
D2Dcr54 | 2 | 136 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 54 | ||
Pax6os1 | 2 | 134250 | - | antisense lncRNA gene | paired box 6 opposite strand 1 | |
Gm13890 | 2 | 389 | - | pseudogene | predicted gene 13890 | |
Rpl10-ps1 | 2 | 644 | - | pseudogene | ribosomal protein L10, pseudogene 1 | |
Gm35946 | 2 | 9200 | + | lncRNA gene | predicted gene, 35946 | |
Paupar | 2 | 3481 | - | lincRNA gene | Pax6 upstream antisense RNA | |
Cpgi12014 | 2 | 362 | CpG island | CpG island 12014 | ||
Tssr19248 | 2 | 12 | + | TSS region | transcription start site region 19248 | |
Tssr19249 | 2 | 12 | + | TSS region | transcription start site region 19249 | |
Cpgi12015 | 2 | 171 | CpG island | CpG island 12015 | ||
Cpgi12016 | 2 | 309 | CpG island | CpG island 12016 | ||
Cpgi12017 | 2 | 497 | CpG island | CpG island 12017 | ||
Tssr19250 | 2 | 26 | + | TSS region | transcription start site region 19250 | |
Pax6 | 2 | 28464 | + | protein coding gene | paired box 6 | |
Tssr19251 | 2 | 7 | + | TSS region | transcription start site region 19251 | |
Cpgi12018 | 2 | 948 | CpG island | CpG island 12018 | ||
Tssr25562 | 2 | 7 | - | TSS region | transcription start site region 25562 | |
Tssr25563 | 2 | 21 | - | TSS region | transcription start site region 25563 | |
Cpgi12019 | 2 | 197 | CpG island | CpG island 12019 | ||
Tssr25564 | 2 | 3 | - | TSS region | transcription start site region 25564 | |
Tssr19252 | 2 | 16 | + | TSS region | transcription start site region 19252 | |
Tssr19253 | 2 | 11 | + | TSS region | transcription start site region 19253 | |
Tssr19254 | 2 | 15 | + | TSS region | transcription start site region 19254 | |
Cpgi12020 | 2 | 2288 | CpG island | CpG island 12020 | ||
Tssr25565 | 2 | 19 | - | TSS region | transcription start site region 25565 | |
Tssr19255 | 2 | 20 | + | TSS region | transcription start site region 19255 | |
Tssr19256 | 2 | 26 | + | TSS region | transcription start site region 19256 | |
Tssr19257 | 2 | 8 | + | TSS region | transcription start site region 19257 | |
Tssr19258 | 2 | 15 | + | TSS region | transcription start site region 19258 | |
Tssr19259 | 2 | 11 | + | TSS region | transcription start site region 19259 | |
Tssr19260 | 2 | 9 | + | TSS region | transcription start site region 19260 | |
Tssr19261 | 2 | 10 | + | TSS region | transcription start site region 19261 | |
Cpgi12021 | 2 | 531 | CpG island | CpG island 12021 | ||
Cpgi12022 | 2 | 325 | CpG island | CpG island 12022 | ||
Tssr19262 | 2 | 11 | + | TSS region | transcription start site region 19262 | |
Tssr19263 | 2 | 3 | + | TSS region | transcription start site region 19263 | |
Tssr19264 | 2 | 25 | + | TSS region | transcription start site region 19264 | |
Tssr19265 | 2 | 4 | + | TSS region | transcription start site region 19265 | |
Tssr19266 | 2 | 17 | + | TSS region | transcription start site region 19266 | |
Tssr19267 | 2 | 9 | + | TSS region | transcription start site region 19267 | |
Tssr19268 | 2 | 4 | + | TSS region | transcription start site region 19268 | |
Tssr588 | 2 | 28 | + | TSS region | transcription start site region 588 | |
Tssr19269 | 2 | 9 | + | TSS region | transcription start site region 19269 | |
Tssr19270 | 2 | 8 | + | TSS region | transcription start site region 19270 | |
Elp4 | 2 | 203537 | - | protein coding gene | elongator acetyltransferase complex subunit 4 | |
Gm13954 | 2 | 1099 | + | antisense lncRNA gene | predicted gene 13954 | |
A130004G07Rik | 2 | 5313 | unclassified non-coding RNA gene | RIKEN cDNA A130004G07 gene | ||
Tssr25566 | 2 | 3 | - | TSS region | transcription start site region 25566 | |
Cpgi12023 | 2 | 574 | CpG island | CpG island 12023 | ||
Tssr25567 | 2 | 43 | - | TSS region | transcription start site region 25567 | |
Tssr19271 | 2 | 56 | + | TSS region | transcription start site region 19271 | |
Immp1l | 2 | 60920 | + | protein coding gene | IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) | |
Gm4415 | 2 | 4893 | protein coding gene | predicted gene 4415 | ||
Tssr25568 | 2 | 3 | - | TSS region | transcription start site region 25568 | |
Dnajc24 | 2 | 36840 | - | protein coding gene | DnaJ heat shock protein family (Hsp40) member C24 | |
Gm22002 | 2 | 124 | + | miRNA gene | predicted gene, 22002 | |
n-R5s201 | 2 | 115 | + | rRNA gene | nuclear encoded rRNA 5S 201 | |
Cpgi12024 | 2 | 566 | CpG island | CpG island 12024 | ||
Tssr25569 | 2 | 96 | - | TSS region | transcription start site region 25569 | |
Tssr19272 | 2 | 13 | + | TSS region | transcription start site region 19272 | |
Tssr19273 | 2 | 33 | + | TSS region | transcription start site region 19273 | |
Gm13992 | 2 | 155 | + | pseudogene | predicted gene 13992 | |
D2Dcr55 | 2 | 101 | DNA segment | DNA Segment, Chr 2, Derry C. Roopenian 55 | ||
Gm9342 | 2 | 15310 | + | pseudogene | predicted gene 9342 | |
Gm29053 | 2 | 2033 | - | lincRNA gene | predicted gene 29053 | |
Dcdc5 | 2 | 327739 | + | protein coding gene | doublecortin domain containing 5 | |
Tssr19274 | 2 | 5 | + | TSS region | transcription start site region 19274 | |
Tssr19275 | 2 | 11 | + | TSS region | transcription start site region 19275 | |
Tssr19276 | 2 | 8 | + | TSS region | transcription start site region 19276 | |
Cpgi12025 | 2 | 245 | CpG island | CpG island 12025 | ||
Tssr19277 | 2 | 9 | + | TSS region | transcription start site region 19277 |