Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:103787101-103887517

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Caprin1 2 103762945 to 103797640 34695 - protein coding gene cell cycle associated protein 1
Tssr19172 2 103795948 to 103795962 14 + TSS region transcription start site region 19172
Tssr19173 2 103795970 to 103796015 45 + TSS region transcription start site region 19173
Cpgi11985 2 103796279 to 103798124 1845 CpG island CpG island 11985
Tssr25500 2 103796936 to 103796978 42 - TSS region transcription start site region 25500
Tssr25501 2 103796989 to 103797088 99 - TSS region transcription start site region 25501
Gm39894 2 103797207 to 103830155 32948 + lncRNA gene predicted gene, 39894
Tssr586 2 103797569 to 103797574 5 - TSS region transcription start site region 586
Tssr25502 2 103797592 to 103797612 20 - TSS region transcription start site region 25502
Tssr25503 2 103797617 to 103797662 45 - TSS region transcription start site region 25503
4930547E08Rik 2 103804452 to 103810622 6170 - lncRNA gene RIKEN cDNA 4930547E08 gene
Gm13878 2 103810886 to 103811617 731 - pseudogene predicted gene 13878
Gm13880 2 103819003 to 103819476 473 - pseudogene predicted gene 13880
Cpgi11986 2 103819335 to 103819629 294 CpG island CpG island 11986
Tssr25504 2 103819341 to 103819353 12 - TSS region transcription start site region 25504
Tssr25505 2 103819665 to 103819670 5 - TSS region transcription start site region 25505
Gm13877 2 103837101 to 103837517 416 - pseudogene predicted gene 13877
Tssr19174 2 103838920 to 103838928 8 + TSS region transcription start site region 19174
Gm13875 2 103838954 to 103839235 281 + pseudogene predicted gene 13875
Gm22757 2 103839109 to 103839204 95 + miRNA gene predicted gene, 22757
Gm13879 2 103843415 to 103843656 241 - pseudogene predicted gene 13879
Gm22761 2 103843418 to 103843513 95 - miRNA gene predicted gene, 22761
Gm34948 2 103884992 to 103897710 12718 - lncRNA gene predicted gene, 34948