Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:103446310-103838423

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79 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Elf5 2 103411693 to 103450989 39296 + protein coding gene E74-like factor 5
Cat 2 103453904 to 103485153 31249 - protein coding gene catalase
Tssr25465 2 103454228 to 103454242 14 - TSS region transcription start site region 25465
Tssr19157 2 103454259 to 103454280 21 + TSS region transcription start site region 19157
Tssr19158 2 103454296 to 103454317 21 + TSS region transcription start site region 19158
Tssr25466 2 103454323 to 103454330 7 - TSS region transcription start site region 25466
Tssr19159 2 103454341 to 103454366 25 + TSS region transcription start site region 19159
Tssr25467 2 103454349 to 103454390 41 - TSS region transcription start site region 25467
Tssr25468 2 103454400 to 103454423 23 - TSS region transcription start site region 25468
Tssr25469 2 103454449 to 103454466 17 - TSS region transcription start site region 25469
Tssr25470 2 103454486 to 103454491 5 - TSS region transcription start site region 25470
Tssr25471 2 103454515 to 103454534 19 - TSS region transcription start site region 25471
Tssr25472 2 103454551 to 103454580 29 - TSS region transcription start site region 25472
Tssr25473 2 103454606 to 103454615 9 - TSS region transcription start site region 25473
Tssr25474 2 103454618 to 103454625 7 - TSS region transcription start site region 25474
Tssr25475 2 103454631 to 103454688 57 - TSS region transcription start site region 25475
Tssr25476 2 103454698 to 103454707 9 - TSS region transcription start site region 25476
Tssr25477 2 103454725 to 103454734 9 - TSS region transcription start site region 25477
Tssr25478 2 103455113 to 103455131 18 - TSS region transcription start site region 25478
Tssr25479 2 103455134 to 103455164 30 - TSS region transcription start site region 25479
Tssr25480 2 103456874 to 103456926 52 - TSS region transcription start site region 25480
Tssr19160 2 103456886 to 103456898 12 + TSS region transcription start site region 19160
Tssr19161 2 103456901 to 103456924 23 + TSS region transcription start site region 19161
Tssr25481 2 103460340 to 103460378 38 - TSS region transcription start site region 25481
Tssr25482 2 103467197 to 103467234 37 - TSS region transcription start site region 25482
Tssr25483 2 103467742 to 103467789 47 - TSS region transcription start site region 25483
Tssr25484 2 103470381 to 103470418 37 - TSS region transcription start site region 25484
Cpgi11981 2 103484651 to 103485262 611 CpG island CpG island 11981
Tssr25485 2 103485068 to 103485137 69 - TSS region transcription start site region 25485
Tssr25486 2 103485138 to 103485158 20 - TSS region transcription start site region 25486
Tssr25487 2 103485767 to 103485779 12 - TSS region transcription start site region 25487
Gm13996 2 103547259 to 103547688 429 + pseudogene predicted gene 13996
Cpgi11982 2 103565167 to 103565533 366 CpG island CpG island 11982
Cpgi11983 2 103566105 to 103567625 1520 CpG island CpG island 11983
Tssr584 2 103566285 to 103566286 1 + TSS region transcription start site region 584
Tssr19162 2 103566304 to 103566323 19 + TSS region transcription start site region 19162
Abtb2 2 103566310 to 103718423 152113 + protein coding gene ankyrin repeat and BTB (POZ) domain containing 2
Tssr19163 2 103566342 to 103566351 9 + TSS region transcription start site region 19163
Tssr19164 2 103572121 to 103572125 4 + TSS region transcription start site region 19164
Tssr19165 2 103575369 to 103575373 4 + TSS region transcription start site region 19165
Tssr19166 2 103583593 to 103583602 9 + TSS region transcription start site region 19166
8030431J09Rik 2 103583716 to 103609861 26145 + lncRNA gene RIKEN cDNA 8030431J09 gene
Tssr25488 2 103605805 to 103605810 5 - TSS region transcription start site region 25488
Tssr25489 2 103605820 to 103605840 20 - TSS region transcription start site region 25489
Tssr585 2 103605865 to 103605867 2 - TSS region transcription start site region 585
Tssr19167 2 103606415 to 103606425 10 + TSS region transcription start site region 19167
Tssr19168 2 103606428 to 103606441 13 + TSS region transcription start site region 19168
Tssr19169 2 103612362 to 103612366 4 + TSS region transcription start site region 19169
Nat10 2 103721256 to 103761270 40014 - protein coding gene N-acetyltransferase 10
Cpgi11984 2 103760724 to 103761538 814 CpG island CpG island 11984
Tssr25490 2 103760922 to 103760941 19 - TSS region transcription start site region 25490
Tssr25491 2 103761078 to 103761090 12 - TSS region transcription start site region 25491
Tssr25492 2 103761163 to 103761172 9 - TSS region transcription start site region 25492
Tssr25493 2 103761178 to 103761286 108 - TSS region transcription start site region 25493
Tssr19170 2 103761413 to 103761426 13 + TSS region transcription start site region 19170
Tssr19171 2 103761477 to 103761485 8 + TSS region transcription start site region 19171
Caprin1 2 103762945 to 103797640 34695 - protein coding gene cell cycle associated protein 1
Tssr25494 2 103766495 to 103766509 14 - TSS region transcription start site region 25494
Tssr25495 2 103768878 to 103768906 28 - TSS region transcription start site region 25495
Tssr25496 2 103773045 to 103773061 16 - TSS region transcription start site region 25496
Tssr25497 2 103775954 to 103775972 18 - TSS region transcription start site region 25497
Tssr25498 2 103779366 to 103779401 35 - TSS region transcription start site region 25498
Tssr25499 2 103783159 to 103783172 13 - TSS region transcription start site region 25499
Tssr19172 2 103795948 to 103795962 14 + TSS region transcription start site region 19172
Tssr19173 2 103795970 to 103796015 45 + TSS region transcription start site region 19173
Cpgi11985 2 103796279 to 103798124 1845 CpG island CpG island 11985
Tssr25500 2 103796936 to 103796978 42 - TSS region transcription start site region 25500
Tssr25501 2 103796989 to 103797088 99 - TSS region transcription start site region 25501
Gm39894 2 103797207 to 103830155 32948 + lncRNA gene predicted gene, 39894
Tssr586 2 103797569 to 103797574 5 - TSS region transcription start site region 586
Tssr25502 2 103797592 to 103797612 20 - TSS region transcription start site region 25502
Tssr25503 2 103797617 to 103797662 45 - TSS region transcription start site region 25503
4930547E08Rik 2 103804452 to 103810622 6170 - lncRNA gene RIKEN cDNA 4930547E08 gene
Gm13878 2 103810886 to 103811617 731 - pseudogene predicted gene 13878
Gm13880 2 103819003 to 103819476 473 - pseudogene predicted gene 13880
Cpgi11986 2 103819335 to 103819629 294 CpG island CpG island 11986
Tssr25504 2 103819341 to 103819353 12 - TSS region transcription start site region 25504
Tssr25505 2 103819665 to 103819670 5 - TSS region transcription start site region 25505
Gm13877 2 103837101 to 103837517 416 - pseudogene predicted gene 13877