Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:102872931-102973739

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd44 2 102811141 to 102901665 90524 - protein coding gene CD44 antigen
Tssr25445 2 102896052 to 102896076 24 - TSS region transcription start site region 25445
Gm23731 2 102897960 to 102898066 106 + snRNA gene predicted gene, 23731
Tssr25446 2 102897963 to 102897992 29 - TSS region transcription start site region 25446
Tssr19138 2 102899417 to 102899435 18 + TSS region transcription start site region 19138
Tssr25447 2 102900226 to 102900229 3 - TSS region transcription start site region 25447
Cpgi11979 2 102901229 to 102901596 367 CpG island CpG island 11979
Tssr25448 2 102901449 to 102901465 16 - TSS region transcription start site region 25448
Del(2Cd44-Hoxd11)43Ddu 2 102901665 to 74679558 -28222107 chromosomal deletion deletion, Chr 2, Denis Duboule 43
In(2Cd44;Hoxd11)2Ddu 2 102901665 to 74679558 -28222107 chromosomal inversion inversion, Chr 2, Denis Duboule 2
Tssr25449 2 102901996 to 102902031 35 - TSS region transcription start site region 25449
4933435N07Rik 2 102922931 to 102923739 808 unclassified gene RIKEN cDNA 4933435N07 gene
Tssr25450 2 102923727 to 102923740 13 - TSS region transcription start site region 25450
Tssr19139 2 102941054 to 102941077 23 + TSS region transcription start site region 19139
Gm34483 2 102941058 to 102960573 19515 + lncRNA gene predicted gene, 34483
Tssr19140 2 102944249 to 102944260 11 + TSS region transcription start site region 19140
Tssr579 2 102948024 to 102948060 36 + TSS region transcription start site region 579
Tssr19141 2 102948772 to 102948778 6 + TSS region transcription start site region 19141
Tssr25451 2 102967530 to 102967537 7 - TSS region transcription start site region 25451
Tssr580 2 102968536 to 102968541 5 - TSS region transcription start site region 580
Tssr25452 2 102968544 to 102968549 5 - TSS region transcription start site region 25452
Tssr25453 2 102968582 to 102968590 8 - TSS region transcription start site region 25453
Tssr19142 2 102968707 to 102968716 9 + TSS region transcription start site region 19142