Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:102798024-103098060

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cd44 2 102811141 to 102901665 90524 - protein coding gene CD44 antigen
Tssr25407 2 102811633 to 102811645 12 - TSS region transcription start site region 25407
Tssr25408 2 102811831 to 102811844 13 - TSS region transcription start site region 25408
Tssr25409 2 102811867 to 102811882 15 - TSS region transcription start site region 25409
Tssr25410 2 102812173 to 102812189 16 - TSS region transcription start site region 25410
Tssr25411 2 102812378 to 102812400 22 - TSS region transcription start site region 25411
Tssr25412 2 102812492 to 102812504 12 - TSS region transcription start site region 25412
Tssr25413 2 102812510 to 102812529 19 - TSS region transcription start site region 25413
Tssr25414 2 102812615 to 102812629 14 - TSS region transcription start site region 25414
Tssr25415 2 102812664 to 102812711 47 - TSS region transcription start site region 25415
Tssr25416 2 102812742 to 102812777 35 - TSS region transcription start site region 25416
Tssr25417 2 102812833 to 102812845 12 - TSS region transcription start site region 25417
Tssr25418 2 102813449 to 102813469 20 - TSS region transcription start site region 25418
Tssr25419 2 102813511 to 102813542 31 - TSS region transcription start site region 25419
Tssr25420 2 102813571 to 102813585 14 - TSS region transcription start site region 25420
Tssr25421 2 102813649 to 102813673 24 - TSS region transcription start site region 25421
Tssr25422 2 102813713 to 102813724 11 - TSS region transcription start site region 25422
Tssr25423 2 102813730 to 102813741 11 - TSS region transcription start site region 25423
Tssr25424 2 102813856 to 102813867 11 - TSS region transcription start site region 25424
Tssr25425 2 102813871 to 102813882 11 - TSS region transcription start site region 25425
Tssr25426 2 102813921 to 102813928 7 - TSS region transcription start site region 25426
Tssr25427 2 102814023 to 102814034 11 - TSS region transcription start site region 25427
Tssr25428 2 102814130 to 102814141 11 - TSS region transcription start site region 25428
Tssr25429 2 102825539 to 102825588 49 - TSS region transcription start site region 25429
Tssr25430 2 102828576 to 102828580 4 - TSS region transcription start site region 25430
Tssr25431 2 102829170 to 102829176 6 - TSS region transcription start site region 25431
Tssr25432 2 102829386 to 102829407 21 - TSS region transcription start site region 25432
Tssr25433 2 102829461 to 102829471 10 - TSS region transcription start site region 25433
Tssr25434 2 102835779 to 102835808 29 - TSS region transcription start site region 25434
Tssr25435 2 102835836 to 102835871 35 - TSS region transcription start site region 25435
Tssr25436 2 102835891 to 102835911 20 - TSS region transcription start site region 25436
Tssr25437 2 102861604 to 102861626 22 - TSS region transcription start site region 25437
Tssr25438 2 102861640 to 102861691 51 - TSS region transcription start site region 25438
Tssr25439 2 102861692 to 102861712 20 - TSS region transcription start site region 25439
Tssr25440 2 102865333 to 102865355 22 - TSS region transcription start site region 25440
Tssr25441 2 102865357 to 102865408 51 - TSS region transcription start site region 25441
Tssr25442 2 102865535 to 102865538 3 - TSS region transcription start site region 25442
Tssr25443 2 102866682 to 102866684 2 - TSS region transcription start site region 25443
Tssr25444 2 102868702 to 102868712 10 - TSS region transcription start site region 25444
Tssr25445 2 102896052 to 102896076 24 - TSS region transcription start site region 25445
Gm23731 2 102897960 to 102898066 106 + snRNA gene predicted gene, 23731
Tssr25446 2 102897963 to 102897992 29 - TSS region transcription start site region 25446
Tssr19138 2 102899417 to 102899435 18 + TSS region transcription start site region 19138
Tssr25447 2 102900226 to 102900229 3 - TSS region transcription start site region 25447
Cpgi11979 2 102901229 to 102901596 367 CpG island CpG island 11979
Tssr25448 2 102901449 to 102901465 16 - TSS region transcription start site region 25448
Del(2Cd44-Hoxd11)43Ddu 2 102901665 to 74679558 -28222107 chromosomal deletion deletion, Chr 2, Denis Duboule 43
In(2Cd44;Hoxd11)2Ddu 2 102901665 to 74679558 -28222107 chromosomal inversion inversion, Chr 2, Denis Duboule 2
Tssr25449 2 102901996 to 102902031 35 - TSS region transcription start site region 25449
4933435N07Rik 2 102922931 to 102923739 808 unclassified gene RIKEN cDNA 4933435N07 gene
Tssr25450 2 102923727 to 102923740 13 - TSS region transcription start site region 25450
Tssr19139 2 102941054 to 102941077 23 + TSS region transcription start site region 19139
Gm34483 2 102941058 to 102960573 19515 + lncRNA gene predicted gene, 34483
Tssr19140 2 102944249 to 102944260 11 + TSS region transcription start site region 19140
Tssr579 2 102948024 to 102948060 36 + TSS region transcription start site region 579
Tssr19141 2 102948772 to 102948778 6 + TSS region transcription start site region 19141
Tssr25451 2 102967530 to 102967537 7 - TSS region transcription start site region 25451
Tssr580 2 102968536 to 102968541 5 - TSS region transcription start site region 580
Tssr25452 2 102968544 to 102968549 5 - TSS region transcription start site region 25452
Tssr25453 2 102968582 to 102968590 8 - TSS region transcription start site region 25453
Tssr19142 2 102968707 to 102968716 9 + TSS region transcription start site region 19142
Tssr19143 2 102998577 to 102998587 10 + TSS region transcription start site region 19143
Tssr19144 2 102998593 to 102998604 11 + TSS region transcription start site region 19144
Tssr581 2 103008382 to 103008392 10 + TSS region transcription start site region 581
Tssr19145 2 103009583 to 103009628 45 + TSS region transcription start site region 19145
Pdhx 2 103021075 to 103073513 52438 - protein coding gene pyruvate dehydrogenase complex, component X
Cpgi11980 2 103073059 to 103074005 946 CpG island CpG island 11980
Tssr25454 2 103073449 to 103073492 43 - TSS region transcription start site region 25454
Tssr19146 2 103073669 to 103073755 86 + TSS region transcription start site region 19146
Apip 2 103073675 to 103092644 18969 + protein coding gene APAF1 interacting protein
Tssr19147 2 103073764 to 103073788 24 + TSS region transcription start site region 19147
D2Mit388 2 103086226 to 103086400 174 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 388