Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:101488319-101638333

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D2Mit438.1 2 101488286 to 101488395 109 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 438.1
Gm39887 2 101549837 to 101557787 7950 - lncRNA gene predicted gene, 39887
Tssr19069 2 101550384 to 101550395 11 + TSS region transcription start site region 19069
B230118H07Rik 2 101560781 to 101629332 68551 - protein coding gene RIKEN cDNA B230118H07 gene
Tssr19070 2 101563319 to 101563333 14 + TSS region transcription start site region 19070
Gm20693 2 101570624 to 101570834 210 + pseudogene predicted gene 20693
Tssr19071 2 101581551 to 101581593 42 + TSS region transcription start site region 19071
A130042O14Rik 2 101600588 to 101604701 4113 unclassified non-coding RNA gene RIKEN cDNA A130042O14 gene
Tssr25358 2 101621033 to 101621066 33 - TSS region transcription start site region 25358
Tssr19072 2 101621781 to 101621792 11 + TSS region transcription start site region 19072
Tssr19073 2 101621795 to 101621811 16 + TSS region transcription start site region 19073
Tssr25359 2 101624091 to 101624094 3 - TSS region transcription start site region 25359
Tssr19074 2 101624677 to 101624695 18 + TSS region transcription start site region 19074
Tssr19075 2 101624696 to 101624730 34 + TSS region transcription start site region 19075
Tssr19076 2 101624734 to 101624756 22 + TSS region transcription start site region 19076
Rag2 2 101624748 to 101632528 7780 + protein coding gene recombination activating gene 2
Tssr19077 2 101624769 to 101624780 11 + TSS region transcription start site region 19077
Tssr19078 2 101627406 to 101627421 15 + TSS region transcription start site region 19078
Cpgi11969 2 101628713 to 101629023 310 CpG island CpG island 11969
Tssr25360 2 101628930 to 101628954 24 - TSS region transcription start site region 25360
Tssr25361 2 101628958 to 101629014 56 - TSS region transcription start site region 25361
Tssr25362 2 101629016 to 101629025 9 - TSS region transcription start site region 25362
Tssr25363 2 101629026 to 101629034 8 - TSS region transcription start site region 25363
Rag1 2 101638282 to 101649501 11219 - protein coding gene recombination activating 1