Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:10146839-10477047

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11191 2 10153470 to 10153880 410 CpG island CpG island 11191
Tssr16078 2 10153549 to 10153560 11 + TSS region transcription start site region 16078
Tssr16079 2 10153563 to 10153627 64 + TSS region transcription start site region 16079
Itih5 2 10153571 to 10256529 102958 + protein coding gene inter-alpha (globulin) inhibitor H5
Tssr16080 2 10153633 to 10153654 21 + TSS region transcription start site region 16080
Tssr16081 2 10165685 to 10165689 4 + TSS region transcription start site region 16081
D2Mit31.1 2 10243822 to 10243943 121 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 31.1
D2Mit31 2 10243908 to 10244044 136 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 31
5730405A10Rik 2 10276438 to 10277417 979 unclassified gene RIKEN cDNA 5730405A10 gene
Gm31496 2 10305663 to 10307590 1927 - lncRNA gene predicted gene, 31496
Cpgi11192 2 10311839 to 10312047 208 CpG island CpG island 11192
Gm39758 2 10317088 to 10320201 3113 - lncRNA gene predicted gene, 39758
Gm13261 2 10339283 to 10374041 34758 - lncRNA gene predicted gene 13261
Tssr16082 2 10365353 to 10365403 50 + TSS region transcription start site region 16082
Tssr16083 2 10370494 to 10370517 23 + TSS region transcription start site region 16083
Sfmbt2 2 10370510 to 10595253 224743 + protein coding gene Scm-like with four mbt domains 2
Tssr16084 2 10371265 to 10371288 23 + TSS region transcription start site region 16084
Tssr16085 2 10371351 to 10371355 4 + TSS region transcription start site region 16085
Cpgi11193 2 10371521 to 10371718 197 CpG island CpG island 11193
Tssr16086 2 10371609 to 10371614 5 + TSS region transcription start site region 16086
Cpgi11194 2 10372184 to 10372688 504 CpG island CpG island 11194
Tssr16087 2 10372336 to 10372347 11 + TSS region transcription start site region 16087
Tssr16088 2 10372426 to 10372497 71 + TSS region transcription start site region 16088
Tssr16089 2 10372551 to 10372564 13 + TSS region transcription start site region 16089
Cpgi11195 2 10373843 to 10374477 634 CpG island CpG island 11195
Cpgi11196 2 10374644 to 10375423 779 CpG island CpG island 11196
Tssr16090 2 10380551 to 10380556 5 + TSS region transcription start site region 16090
Tssr16091 2 10439875 to 10439879 4 + TSS region transcription start site region 16091
Tssr16092 2 10449084 to 10449104 20 + TSS region transcription start site region 16092
Gm22072 2 10465287 to 10465407 120 + miRNA gene predicted gene, 22072
Gm22677 2 10465760 to 10465867 107 + miRNA gene predicted gene, 22677
Mir466m 2 10466663 to 10466746 83 + miRNA gene microRNA 466m
Mir466f-1 2 10466944 to 10467037 93 + miRNA gene microRNA 466f-1
Mir669f 2 10467229 to 10467349 120 + miRNA gene microRNA 669f
Mir669e 2 10467495 to 10467613 118 + miRNA gene microRNA 669e
Mir669b 2 10467790 to 10467886 96 + miRNA gene microRNA 669b
Gm23578 2 10468069 to 10468172 103 + miRNA gene predicted gene, 23578
Mir669d 2 10468343 to 10468463 120 + miRNA gene microRNA 669d
Mir466f-2 2 10468675 to 10468768 93 + miRNA gene microRNA 466f-2
Mir669l 2 10468971 to 10469068 97 + miRNA gene microRNA 669l
Mir669d-2 2 10471644 to 10471729 85 + miRNA gene microRNA 669d-2
Mir466f-3 2 10471953 to 10472046 93 + miRNA gene microRNA 466f-3
Mir297a-2 2 10472254 to 10472343 89 + miRNA gene microRNA 297a-2
Mir466o 2 10472540 to 10472623 83 + miRNA gene microRNA 466o
Gm26073 2 10473351 to 10473477 126 + miRNA gene predicted gene, 26073
Mir467c 2 10473931 to 10474027 96 + miRNA gene microRNA 467c
Mir466b-1 2 10474219 to 10474300 81 + miRNA gene microRNA 466b-1
Mir669a-3 2 10474433 to 10474541 108 + miRNA gene microRNA 669a-3
Mir669k 2 10475300 to 10475426 126 + miRNA gene microRNA 669k
Gm26491 2 10475500 to 10475620 120 + miRNA gene predicted gene, 26491
Mir467a-1 2 10476346 to 10476418 72 + miRNA gene microRNA 467a-1
Mir466b-8 2 10476628 to 10476713 85 + miRNA gene microRNA 466b-8
Mir669a-1 2 10476853 to 10476949 96 + miRNA gene microRNA 669a-1