Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:9077999-10878038

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453 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
ocd 19 5758427 to 9933333 4174906 heritable phenotypic marker osteochondrodystrophy
Cpgi10591 19 9082584 to 9082804 220 CpG island CpG island 10591
Tssr154963 19 9083637 to 9083648 11 + TSS region transcription start site region 154963
Scgb1a1 19 9083642 to 9087956 4314 - protein coding gene secretoglobin, family 1A, member 1 (uteroglobin)
Tssr158088 19 9083667 to 9083702 35 - TSS region transcription start site region 158088
Tssr154964 19 9083699 to 9083704 5 + TSS region transcription start site region 154964
Tssr158089 19 9083714 to 9083723 9 - TSS region transcription start site region 158089
Tssr154965 19 9083714 to 9083721 7 + TSS region transcription start site region 154965
Tssr158090 19 9083726 to 9083743 17 - TSS region transcription start site region 158090
Tssr158091 19 9083745 to 9083750 5 - TSS region transcription start site region 158091
Tssr158092 19 9083751 to 9083776 25 - TSS region transcription start site region 158092
Tssr158093 19 9083791 to 9083800 9 - TSS region transcription start site region 158093
Tssr158094 19 9083803 to 9083813 10 - TSS region transcription start site region 158094
Tssr154966 19 9085183 to 9085204 21 + TSS region transcription start site region 154966
Tssr158095 19 9085220 to 9085339 119 - TSS region transcription start site region 158095
Tssr158096 19 9085341 to 9085350 9 - TSS region transcription start site region 158096
Tssr158097 19 9085355 to 9085408 53 - TSS region transcription start site region 158097
Tssr158098 19 9087945 to 9087962 17 - TSS region transcription start site region 158098
Gm41805 19 9099766 to 9102711 2945 + lncRNA gene predicted gene, 41805
Tssr154967 19 9102472 to 9102479 7 + TSS region transcription start site region 154967
Tssr154968 19 9102513 to 9102534 21 + TSS region transcription start site region 154968
Asrgl1 19 9111719 to 9135566 23847 - protein coding gene asparaginase like 1
Cpgi10592 19 9134684 to 9135797 1113 CpG island CpG island 10592
Tssr158099 19 9135036 to 9135051 15 - TSS region transcription start site region 158099
Tssr154969 19 9135154 to 9135160 6 + TSS region transcription start site region 154969
Tssr158100 19 9135556 to 9135602 46 - TSS region transcription start site region 158100
Tssr158101 19 9135603 to 9135635 32 - TSS region transcription start site region 158101
Tssr154970 19 9170728 to 9170729 1 + TSS region transcription start site region 154970
Gm38656 19 9185225 to 9187019 1794 - protein coding gene predicted gene, 38656
Gm6252 19 9216311 to 9216995 684 + unclassified gene predicted gene 6252
Tssr154971 19 9216338 to 9216345 7 + TSS region transcription start site region 154971
Gm24543 19 9234897 to 9234978 81 - miRNA gene predicted gene, 24543
Gm9750 19 9272142 to 9276614 4472 + lncRNA gene predicted gene 9750
Tssr154972 19 9283231 to 9283265 34 + TSS region transcription start site region 154972
Pcna-ps2 19 9283238 to 9284494 1256 + pseudogene proliferating cell nuclear antigen pseudogene 2
Tssr154973 19 9283563 to 9283607 44 + TSS region transcription start site region 154973
Gm2617 19 9323219 to 9339986 16767 - pseudogene predicted gene 2617
Stxbp3-ps 19 9557792 to 9559183 1391 - pseudogene syntaxin-binding protein 3, pseudogene
Tssr158102 19 9559204 to 9559248 44 - TSS region transcription start site region 158102
Gm29231 19 9605121 to 9614034 8913 + pseudogene predicted gene 29231
Tssr154974 19 9606814 to 9606836 22 + TSS region transcription start site region 154974
Gm6445 19 9607104 to 9608376 1272 + pseudogene predicted gene 6445
Tssr158103 19 9744120 to 9744126 6 - TSS region transcription start site region 158103
Scgb2a2 19 9847435 to 9852046 4611 + protein coding gene secretoglobin, family 2A, member 2
Tssr154975 19 9847556 to 9847560 4 + TSS region transcription start site region 154975
Gm22369 19 9855319 to 9855422 103 + miRNA gene predicted gene, 22369
Incenp 19 9872297 to 9899533 27236 - protein coding gene inner centromere protein
Gm19054 19 9888477 to 9889169 692 + pseudogene predicted gene, 19054
Tssr158104 19 9891119 to 9891122 3 - TSS region transcription start site region 158104
Tssr158105 19 9895944 to 9895962 18 - TSS region transcription start site region 158105
Cpgi10593 19 9898910 to 9899884 974 CpG island CpG island 10593
Tssr158106 19 9899390 to 9899401 11 - TSS region transcription start site region 158106
Tssr158107 19 9899427 to 9899439 12 - TSS region transcription start site region 158107
Tssr158108 19 9899450 to 9899501 51 - TSS region transcription start site region 158108
Tssr154976 19 9899643 to 9899652 9 + TSS region transcription start site region 154976
Tssr154977 19 9899669 to 9899692 23 + TSS region transcription start site region 154977
Tssr154978 19 9899700 to 9899722 22 + TSS region transcription start site region 154978
Tssr154979 19 9899723 to 9899738 15 + TSS region transcription start site region 154979
Tssr154980 19 9899947 to 9899977 30 + TSS region transcription start site region 154980
Tssr158109 19 9905861 to 9905876 15 - TSS region transcription start site region 158109
Gm24484 19 9908158 to 9908278 120 + miRNA gene predicted gene, 24484
Tssr158110 19 9914150 to 9914168 18 - TSS region transcription start site region 158110
Tssr158111 19 9914174 to 9914209 35 - TSS region transcription start site region 158111
Tssr154981 19 9914551 to 9914562 11 + TSS region transcription start site region 154981
Tssr154982 19 9914574 to 9914591 17 + TSS region transcription start site region 154982
Gm36913 19 9924510 to 9947628 23118 - lncRNA gene predicted gene, 36913
Tssr158112 19 9928364 to 9928385 21 - TSS region transcription start site region 158112
Tssr158113 19 9931147 to 9931163 16 - TSS region transcription start site region 158113
Tssr158114 19 9931173 to 9931189 16 - TSS region transcription start site region 158114
Tssr158115 19 9931250 to 9931253 3 - TSS region transcription start site region 158115
D19Mit56 19 9933199 to 9933333 134 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 56
Tssr158116 19 9936703 to 9936731 28 - TSS region transcription start site region 158116
Tssr158117 19 9938762 to 9938808 46 - TSS region transcription start site region 158117
Cpgi10594 19 9938780 to 9938958 178 CpG island CpG island 10594
Tssr158118 19 9938834 to 9938849 15 - TSS region transcription start site region 158118
Tssr154983 19 9938914 to 9938927 13 + TSS region transcription start site region 154983
Tssr154984 19 9939175 to 9939189 14 + TSS region transcription start site region 154984
Tssr154985 19 9939253 to 9939271 18 + TSS region transcription start site region 154985
Tssr154986 19 9939279 to 9939291 12 + TSS region transcription start site region 154986
D19Dcr73 19 9943003 to 9943098 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 73
Tssr158119 19 9945864 to 9945875 11 - TSS region transcription start site region 158119
Tssr158120 19 9945892 to 9945903 11 - TSS region transcription start site region 158120
Tssr158121 19 9947987 to 9947996 9 - TSS region transcription start site region 158121
Tssr158122 19 9954198 to 9954222 24 - TSS region transcription start site region 158122
Tssr158123 19 9954473 to 9954491 18 - TSS region transcription start site region 158123
Tssr158124 19 9954504 to 9954526 22 - TSS region transcription start site region 158124
Tssr154987 19 9954683 to 9954718 35 + TSS region transcription start site region 154987
Tssr154988 19 9954753 to 9954781 28 + TSS region transcription start site region 154988
Tssr154989 19 9954842 to 9954855 13 + TSS region transcription start site region 154989
Tssr154990 19 9954872 to 9954888 16 + TSS region transcription start site region 154990
Tssr158125 19 9955033 to 9955046 13 - TSS region transcription start site region 158125
Tssr154991 19 9955086 to 9955096 10 + TSS region transcription start site region 154991
Tssr154992 19 9955134 to 9955146 12 + TSS region transcription start site region 154992
Tssr158126 19 9964630 to 9964638 8 - TSS region transcription start site region 158126
Gm41806 19 9970121 to 9971605 1484 + lncRNA gene predicted gene, 41806
Tssr158127 19 9974862 to 9974868 6 - TSS region transcription start site region 158127
Tssr154993 19 9975172 to 9975202 30 + TSS region transcription start site region 154993
Tssr158128 19 9977745 to 9977752 7 - TSS region transcription start site region 158128
Tssr154994 19 9977999 to 9978038 39 + TSS region transcription start site region 154994
Tssr158129 19 9978424 to 9978431 7 - TSS region transcription start site region 158129
Tssr158130 19 9978461 to 9978502 41 - TSS region transcription start site region 158130
Tssr154995 19 9978790 to 9978803 13 + TSS region transcription start site region 154995
Tssr154996 19 9978926 to 9978957 31 + TSS region transcription start site region 154996
Tssr154997 19 9980546 to 9980564 18 + TSS region transcription start site region 154997
Tssr154998 19 9980576 to 9980606 30 + TSS region transcription start site region 154998
Tssr154999 19 9980639 to 9980650 11 + TSS region transcription start site region 154999
Tssr155000 19 9980682 to 9980697 15 + TSS region transcription start site region 155000
Tssr155001 19 9980707 to 9980716 9 + TSS region transcription start site region 155001
Tssr155002 19 9980858 to 9980867 9 + TSS region transcription start site region 155002
Cpgi10595 19 9982047 to 9983385 1338 CpG island CpG island 10595
Tssr158131 19 9982425 to 9982435 10 - TSS region transcription start site region 158131
Tssr158132 19 9982441 to 9982449 8 - TSS region transcription start site region 158132
Tssr158133 19 9982484 to 9982506 22 - TSS region transcription start site region 158133
Tssr158134 19 9982512 to 9982531 19 - TSS region transcription start site region 158134
Tssr158135 19 9982546 to 9982567 21 - TSS region transcription start site region 158135
Tssr155003 19 9982694 to 9982711 17 + TSS region transcription start site region 155003
Fth1 19 9982703 to 9985092 2389 + protein coding gene ferritin heavy polypeptide 1
Tssr155004 19 9982848 to 9982852 4 + TSS region transcription start site region 155004
Tssr158136 19 9982891 to 9982940 49 - TSS region transcription start site region 158136
Tssr155005 19 9983088 to 9983118 30 + TSS region transcription start site region 155005
Tssr155006 19 9984178 to 9984219 41 + TSS region transcription start site region 155006
Tssr158137 19 9984219 to 9984237 18 - TSS region transcription start site region 158137
Tssr155007 19 9984247 to 9984292 45 + TSS region transcription start site region 155007
Tssr158138 19 9984265 to 9984326 61 - TSS region transcription start site region 158138
Tssr155008 19 9984557 to 9984583 26 + TSS region transcription start site region 155008
Tssr158139 19 9984585 to 9984619 34 - TSS region transcription start site region 158139
Tssr158140 19 9984806 to 9984840 34 - TSS region transcription start site region 158140
Tssr158141 19 9984857 to 9984868 11 - TSS region transcription start site region 158141
Tssr158142 19 9984873 to 9984893 20 - TSS region transcription start site region 158142
Tssr155009 19 9984903 to 9984929 26 + TSS region transcription start site region 155009
Tssr158143 19 9984932 to 9984959 27 - TSS region transcription start site region 158143
Tssr158144 19 9985089 to 9985097 8 - TSS region transcription start site region 158144
Tssr155010 19 9985093 to 9985117 24 + TSS region transcription start site region 155010
Tssr155011 19 9991589 to 9991590 1 + TSS region transcription start site region 155011
Cpgi10596 19 9992751 to 9993316 565 CpG island CpG island 10596
Tssr158145 19 9992956 to 9992993 37 - TSS region transcription start site region 158145
Tssr158146 19 10001561 to 10001582 21 - TSS region transcription start site region 158146
Tssr158147 19 10001585 to 10001622 37 - TSS region transcription start site region 158147
Tssr158148 19 10001625 to 10001632 7 - TSS region transcription start site region 158148
Best1 19 10001633 to 9985174 -16459 - protein coding gene bestrophin 1
Rab3il1 19 10001674 to 10038380 36706 + protein coding gene RAB3A interacting protein (rabin3)-like 1
Tssr155012 19 10001692 to 10001703 11 + TSS region transcription start site region 155012
Tssr5440 19 10001705 to 10001712 7 + TSS region transcription start site region 5440
Tssr155013 19 10001718 to 10001732 14 + TSS region transcription start site region 155013
Tssr155014 19 10015039 to 10015055 16 + TSS region transcription start site region 155014
Cpgi10597 19 10017759 to 10018616 857 CpG island CpG island 10597
Tssr155015 19 10018220 to 10018237 17 + TSS region transcription start site region 155015
Tssr155016 19 10018241 to 10018257 16 + TSS region transcription start site region 155016
Tssr155017 19 10018265 to 10018276 11 + TSS region transcription start site region 155017
Tssr155018 19 10022769 to 10022799 30 + TSS region transcription start site region 155018
Tssr155019 19 10028464 to 10028477 13 + TSS region transcription start site region 155019
Tssr155020 19 10034672 to 10034689 17 + TSS region transcription start site region 155020
Cpgi10598 19 10040911 to 10042559 1648 CpG island CpG island 10598
Fads3 19 10041548 to 10059671 18123 + protein coding gene fatty acid desaturase 3
Tssr155021 19 10041551 to 10041581 30 + TSS region transcription start site region 155021
Tssr155022 19 10041660 to 10041680 20 + TSS region transcription start site region 155022
Gm29917 19 10046264 to 10047940 1676 - lncRNA gene predicted gene, 29917
D19Mit51 19 10050002 to 10050083 81 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 51
D19Dcr74 19 10051259 to 10051354 95 DNA segment DNA Segment, Chr 19, Derry C. Roopenian 74
Tssr158149 19 10060408 to 10060426 18 - TSS region transcription start site region 158149
Tssr158150 19 10064146 to 10064200 54 - TSS region transcription start site region 158150
Fads2 19 10064164 to 10101503 37339 - protein coding gene fatty acid desaturase 2
Tssr158151 19 10064776 to 10064815 39 - TSS region transcription start site region 158151
Tssr158152 19 10065690 to 10065731 41 - TSS region transcription start site region 158152
Tssr158153 19 10066589 to 10066603 14 - TSS region transcription start site region 158153
Tssr5441 19 10077446 to 10077450 4 + TSS region transcription start site region 5441
D19Mit42 19 10083005 to 10083182 177 DNA segment DNA segment, Chr 19, Massachusetts Institute of Technology 42
Tssr158154 19 10088964 to 10088999 35 - TSS region transcription start site region 158154
Tssr158155 19 10091797 to 10091822 25 - TSS region transcription start site region 158155
Tssr158156 19 10092195 to 10092204 9 - TSS region transcription start site region 158156
Tssr158157 19 10092205 to 10092217 12 - TSS region transcription start site region 158157
Cpgi10599 19 10100658 to 10102241 1583 CpG island CpG island 10599
Tssr5442 19 10101256 to 10101269 13 - TSS region transcription start site region 5442
Tssr158158 19 10101501 to 10101532 31 - TSS region transcription start site region 158158
Tssr158159 19 10101552 to 10101559 7 - TSS region transcription start site region 158159
Tssr158160 19 10101727 to 10101750 23 - TSS region transcription start site region 158160
Tssr158161 19 10101809 to 10101820 11 - TSS region transcription start site region 158161
Tssr158162 19 10101832 to 10101839 7 - TSS region transcription start site region 158162
Tssr158163 19 10121969 to 10121974 5 - TSS region transcription start site region 158163
Tssr155023 19 10177397 to 10177403 6 + TSS region transcription start site region 155023
Cpgi10600 19 10182204 to 10183945 1741 CpG island CpG island 10600
Tssr155024 19 10182868 to 10182879 11 + TSS region transcription start site region 155024
Tssr155025 19 10182885 to 10182896 11 + TSS region transcription start site region 155025
Fads1 19 10182888 to 10196870 13982 + protein coding gene fatty acid desaturase 1
Tssr155026 19 10182906 to 10182917 11 + TSS region transcription start site region 155026
Tssr155027 19 10182921 to 10182969 48 + TSS region transcription start site region 155027
Tssr155028 19 10182994 to 10183005 11 + TSS region transcription start site region 155028
Tssr155029 19 10183007 to 10183036 29 + TSS region transcription start site region 155029
Tssr155030 19 10183037 to 10183048 11 + TSS region transcription start site region 155030
Tssr155031 19 10183147 to 10183156 9 + TSS region transcription start site region 155031
Tssr158164 19 10183456 to 10183469 13 - TSS region transcription start site region 158164
Tssr155032 19 10183522 to 10183546 24 + TSS region transcription start site region 155032
Tssr155033 19 10186147 to 10186162 15 + TSS region transcription start site region 155033
Tssr155034 19 10186824 to 10186835 11 + TSS region transcription start site region 155034
Mir6993 19 10191375 to 10191439 64 + miRNA gene microRNA 6993
Tssr155035 19 10193757 to 10193771 14 + TSS region transcription start site region 155035
Tssr155036 19 10195234 to 10195257 23 + TSS region transcription start site region 155036
Gm10143 19 10198368 to 10202384 4016 + unclassified non-coding RNA gene predicted gene 10143
Fen1 19 10199132 to 10204169 5037 - protein coding gene flap structure specific endonuclease 1
Cpgi10601 19 10203594 to 10204473 879 CpG island CpG island 10601